RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MTNR1BP49286 362 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CREMQ03060 361 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 PCDH1Q08174 1060 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 DMTNQ08495 405 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 EIF2B5Q13144 721 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 EIF4A2Q14240 407 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 KCNB1Q14721 858 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 MYBPC3Q14896 1274 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SF1Q15637 639 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TIGD6Q17RP2 521 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC35G1Q2M3R5 365 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ANKRD39Q53RE8 183 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 C1orf141Q5JVX7 400 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF697Q5TEC3 545 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 MAP1SQ66K74 1059 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CREB3L3Q68CJ9 461 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 MCTP2Q6DN12 878 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 GTF2IRD2BQ6EKJ0 949 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TANGO2Q6ICL3 276 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ACAD10Q6JQN1 1059 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 NUP54Q7Z3B4 507 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 GTF2IRD2Q86UP8 949 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CCDC144CPQ8IYA2 1237 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 THEMISQ8N1K5 641 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ARHGEF39Q8N4T4 335 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 MOSPD2Q8NHP6 518 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 DDX54Q8TDD1 881 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CREB3L4Q8TEY5 395 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ST8SIA4Q92187 359 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 BHMTQ93088 406 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CHFRQ96EP1 664 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 C16orf45Q96MC5 204 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 KCNC2Q96PR1 638 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ZIC5Q96T25 663 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ZDHHC5Q9C0B5 715 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SYNCQ9H7C4 482 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 KCND1Q9NSA2 647 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CACNA2D2Q9NY47 1150 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 LAMP5Q9UJQ1 280 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC39A10Q9ULF5 831 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 STXBP5LQ9Y2K9 1186 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 FCF1Q9Y324 198 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ATP23Q9Y6H3 246 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TLL2Q9Y6L7 1015 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 A0A1W2PPC4 97 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 NT5C1B-RDH14C9J2C7 533 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 C11orf95C9JLR9 678 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 AKR1B15C9JRZ8 316 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 DDX39AO00148 427 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 GTPBP1O00178 669 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 AP3D1O14617 1153 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PSMA7O14818 248 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RGS13O14921 159 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 MTSS1O43312 755 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 WIPF1O43516 503 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SGTAO43765 313 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 COQ9O75208 318 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SNX4O95219 450 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 KCNH1O95259 989 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SCG5P05408 212 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ACADMP11310 421 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 HOXD8P13378 290 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SELPP16109 830 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 LAG3P18627 525 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 MAPK3P27361 379 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 CTCFP49711 727 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC16A1P53985 500 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 NLRP5P59047 1200 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 UBE3AQ05086 875 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ZBTB16Q05516 673 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PAK1Q13153 545 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SURF1Q15526 300 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 OASLQ15646 514 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TSTQ16762 297 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 WDR44Q5JSH3 913 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RSPO2Q6UXX9 243 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 FRMD7Q6ZUT3 714 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 BEND5Q7L4P6 421 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PPP1R42Q7Z4L9 355 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PDZD3Q86UT5 571 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TSPYL5Q86VY4 417 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 OR10H5Q8NGA6 315 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 KLHDC4Q8TBB5 520 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TGFBRAP1Q8WUH2 860 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 CTNNBL1Q8WYA6 563 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ACSF2Q96CM8 615 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ASIC4Q96FT7 647 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PLPPR2Q96GM1 343 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 C1orf159Q96HA4 380 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 BRIP1Q9BX63 1249 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TRIM5Q9C035 493 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 GRIP2Q9C0E4 1043 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 DNAI2Q9GZS0 605 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RABEP2Q9H5N1 569 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RPAP3Q9H6T3 665 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ACAD9Q9H845 621 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms