RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 FNDC1Q4ZHG4 1894 aaPredicted RBP17.47■□□□□ 0.39
CHD3-215ENST00000572750 FAM86C2PA6NEL3 165 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 SFI1A8K8P3 1242 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 B4GALT5O43286 388 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 LIG1P18858 919 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 GATMP50440 423 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 PEX3P56589 373 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 HTRA4P83105 476 aaPredicted RBP17.46■□□□□ 0.39
CHD3-215ENST00000572750 POU5F1BQ06416 359 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 DMP1Q13316 513 aaPredicted RBP17.46■□□□□ 0.39
CHD3-215ENST00000572750 AMHR2Q16671 573 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 TMEM31Q5JXX7 168 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 TWF2Q6IBS0 349 aaKnown RBP17.46■□□□□ 0.39
CHD3-215ENST00000572750 NPAS4Q8IUM7 802 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 CRIPAKQ8N1N5 446 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 CPB2Q96IY4 423 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 RAD9AQ99638 391 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
CHD3-215ENST00000572750 RC3H2Q9HBD1 1191 aaKnown RBP17.46■□□□□ 0.39
CHD3-215ENST00000572750 CCDC169A6NNP5 214 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 EDN1P05305 212 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
CHD3-215ENST00000572750 HOXA11P31270 313 aaPredicted RBP17.45■□□□□ 0.38
CHD3-215ENST00000572750 NPTX2P47972 431 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 E2F4Q16254 413 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 DHX58Q96C10 678 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
CHD3-215ENST00000572750 CCDC113Q9H0I3 377 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 C2orf40Q9H1Z8 148 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 SLC28A3Q9HAS3 691 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 DACT1Q9NYF0 836 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 LRFN2Q9ULH4 789 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 RALGAPA2Q2PPJ7 1873 aa17.45■□□□□ 0.38
CHD3-215ENST00000572750 FGFR1P11362 822 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 ATF7P17544 494 aaPredicted RBP17.44■□□□□ 0.38
CHD3-215ENST00000572750 TAP1Q03518 808 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 PAN2Q504Q3 1202 aaKnown RBP17.44■□□□□ 0.38
CHD3-215ENST00000572750 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 ODF2LQ9ULJ1 636 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
CHD3-215ENST00000572750 USP20Q9Y2K6 914 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 PCDHB7Q9Y5E2 793 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 PHLPP2Q6ZVD8 1323 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 CNTNAP2Q9UHC6 1331 aa17.44■□□□□ 0.38
CHD3-215ENST00000572750 CFAP54Q96N23 3096 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 MYMKA6NI61 221 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 SLC16A4O15374 487 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 TBCAO75347 108 aaKnown RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 DGKIO75912 1065 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 FAM13AO94988 1023 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 PRKCBP05771 671 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 PLS3P13797 630 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 ARF4P18085 180 aaPredicted RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 GIT2Q14161 759 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 PCBP1Q15365 356 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHD3-215ENST00000572750 MAPK6Q16659 721 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 NOTUMQ6P988 496 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 SV2BQ7L1I2 683 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 CDR2LQ86X02 465 aaPredicted RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 ECHDC2Q86YB7 292 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 ZHX3Q9H4I2 956 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 CERS4Q9HA82 394 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 PRMT7Q9NVM4 692 aaPredicted RBP17.43■□□□□ 0.38
CHD3-215ENST00000572750 TMEM161AQ9NX61 479 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 FAM13BQ9NYF5 915 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 MTUS1Q9ULD2 1270 aa17.43■□□□□ 0.38
CHD3-215ENST00000572750 A0A0U1RQF3 1178 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 POLR2DO15514 142 aaKnown RBP17.42■□□□□ 0.38
CHD3-215ENST00000572750 GPR37L1O60883 481 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 PFKFB1P16118 471 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 FAM189BP81408 668 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 UBXN11Q5T124 520 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 STAMQ92783 540 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 LPPQ93052 612 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 ZNF689Q96CS4 500 aaPredicted RBP17.42■□□□□ 0.38
CHD3-215ENST00000572750 EIF2AQ9BY44 585 aaKnown RBP17.42■□□□□ 0.38
CHD3-215ENST00000572750 FZD8Q9H461 694 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 C17orf75Q9HAS0 396 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 RNF19AQ9NV58 838 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 ARHGAP28Q9P2N2 729 aa17.42■□□□□ 0.38
CHD3-215ENST00000572750 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
CHD3-215ENST00000572750 TRIOO75962 3097 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 CACNA1AO00555 2505 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 MEIS3P2A8K0S8 358 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms