RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 PNMA5Q96PV4 448 aa22.28■■□□□ 1.16
NUP88-204ENST00000572290 EIF2AQ9BY44 585 aaKnown RBP22.28■■□□□ 1.16
NUP88-204ENST00000572290 RSAD1Q9HA92 442 aa22.28■■□□□ 1.16
NUP88-204ENST00000572290 POLD4Q9HCU8 107 aa22.28■■□□□ 1.16
NUP88-204ENST00000572290 PRRC2BQ5JSZ5 2229 aaKnown RBP22.28■■□□□ 1.16
NUP88-204ENST00000572290 SPTBN5Q9NRC6 3674 aaKnown RBP22.28■■□□□ 1.16
NUP88-204ENST00000572290 CNTNAP2Q9UHC6 1331 aa22.28■■□□□ 1.16
NUP88-204ENST00000572290 ARID2Q68CP9 1835 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.27■■□□□ 1.16
NUP88-204ENST00000572290 IRS1P35568 1242 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 PBX3P40426 434 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 MYO9BQ13459 2157 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 RALGAPA2Q2PPJ7 1873 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 SMG8Q8ND04 991 aaKnown RBP22.27■■□□□ 1.16
NUP88-204ENST00000572290 PPP2R3CQ969Q6 453 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 FZD8Q9H461 694 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 TBC1D13Q9NVG8 400 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 MTMR6Q9Y217 621 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 IPPQ9Y573 584 aa22.27■■□□□ 1.16
NUP88-204ENST00000572290 NCK2O43639 380 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 STX6O43752 255 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 ITGA4P13612 1032 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 UBA7P41226 1012 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 MAPK6Q16659 721 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 FAM187BQ17R55 369 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 RINT1Q6NUQ1 792 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 URGCPQ8TCY9 931 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 MICAL1Q8TDZ2 1067 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 MRPS27Q92552 414 aaKnown RBP22.26■■□□□ 1.15
NUP88-204ENST00000572290 PABPC5Q96DU9 382 aaKnown RBP22.26■■□□□ 1.15
NUP88-204ENST00000572290 PLIN2Q99541 437 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 RUSC1Q9BVN2 902 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 TRIM6Q9C030 488 aaPredicted RBP22.26■■□□□ 1.15
NUP88-204ENST00000572290 UBN1Q9NPG3 1134 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 SPG21Q9NZD8 308 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 PUF60Q9UHX1 559 aaKnown RBP22.26■■□□□ 1.15
NUP88-204ENST00000572290 LZTS1Q9Y250 596 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 CLIC4Q9Y696 253 aa22.26■■□□□ 1.15
NUP88-204ENST00000572290 A0A1B0GUA9 196 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 SLC26A4O43511 780 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 BMP1P13497 986 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 KCNA5P22460 613 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 LONP1P36776 959 aaKnown RBP22.25■■□□□ 1.15
NUP88-204ENST00000572290 ALDH7A1P49419 539 aaKnown RBP22.25■■□□□ 1.15
NUP88-204ENST00000572290 KCNQ1P51787 676 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 BCAR1P56945 870 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 KRT17Q04695 432 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 RNASELQ05823 741 aaKnown RBP22.25■■□□□ 1.15
NUP88-204ENST00000572290 HYAL1Q12794 435 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 TMEM119Q4V9L6 283 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 FAM173BQ6P4H8 233 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 SLC27A1Q6PCB7 646 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 C1orf186Q6ZWK4 172 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 CDR2LQ86X02 465 aaPredicted RBP22.25■■□□□ 1.15
NUP88-204ENST00000572290 HACE1Q8IYU2 909 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 SLC39A11Q8N1S5 342 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 NRDE2Q9H7Z3 1164 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 TLR9Q9NR96 1032 aa22.25■■□□□ 1.15
NUP88-204ENST00000572290 CARNS1A5YM72 827 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 HIP1RO75146 1068 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 ZC3H11AO75152 810 aaKnown RBP eCLIP22.24■■□□□ 1.15
NUP88-204ENST00000572290 SSBP05455 408 aaKnown RBP eCLIP22.24■■□□□ 1.15
NUP88-204ENST00000572290 PRKCBP05771 671 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 LIG1P18858 919 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 EFNA5P52803 228 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 GRIN1Q05586 938 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 COL19A1Q14993 1142 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 EP400NLQ6ZTU2 488 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 SYT2Q8N9I0 419 aaPredicted RBP22.24■■□□□ 1.15
NUP88-204ENST00000572290 CALML4Q96GE6 196 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 DRC1Q96MC2 740 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 KIFC3Q9BVG8 833 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 TIPINQ9BVW5 301 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 CCDC113Q9H0I3 377 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 ZSCAN16Q9H4T2 348 aaPredicted RBP22.24■■□□□ 1.15
NUP88-204ENST00000572290 IGFLR1Q9H665 355 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 CLDND1Q9NY35 253 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 KANSL3Q9P2N6 904 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 HES2Q9Y543 173 aa22.24■■□□□ 1.15
NUP88-204ENST00000572290 NT5C1B-RDH14C9J2C7 533 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 ACKR2O00590 384 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 NPTXRO95502 500 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 PLA2G4BP0C869 781 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 ERVFC1P60507 584 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 PRPF4BQ13523 1007 aaKnown RBP22.23■■□□□ 1.15
NUP88-204ENST00000572290 PTPAQ15257 358 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 TMEM132AQ24JP5 1023 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 LEXMQ3ZCV2 418 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 PDE12Q6L8Q7 609 aaKnown RBP22.23■■□□□ 1.15
NUP88-204ENST00000572290 ADGRD2Q7Z7M1 963 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 DAW1Q8N136 415 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 APOL6Q9BWW8 343 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 GBP3Q9H0R5 595 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 PCDHGC5Q9Y5F6 944 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 NLRC5Q86WI3 1866 aa22.23■■□□□ 1.15
NUP88-204ENST00000572290 A0A0C4DFX4 3053 aa22.22■■□□□ 1.15
NUP88-204ENST00000572290 CCDC169A6NNP5 214 aa22.22■■□□□ 1.15
NUP88-204ENST00000572290 N4BP3O15049 544 aa22.22■■□□□ 1.15
NUP88-204ENST00000572290 HSP90AA1P07900 732 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms