RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 SDSP20132 328 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 GLUD2P49448 558 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 LIMK1P53667 647 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 ADCY1Q08828 1119 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 CEP55Q53EZ4 464 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 CWC27Q6UX04 472 aaKnown RBP14.78□□□□□ -0.04
CCDC40-208ENST00000572270 SPATA31D4Q6ZUB0 917 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 CTCFLQ8NI51 663 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-208ENST00000572270 PGBD4Q96DM1 585 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 PHF20Q9BVI0 1012 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
CCDC40-208ENST00000572270 GAS2O43903 313 aaKnown RBP14.77□□□□□ -0.05
CCDC40-208ENST00000572270 PAPLNO95428 1278 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 ATP4AP20648 1035 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 RAB27AP51159 221 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 ANKRD45Q5TZF3 282 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 PALB2Q86YC2 1186 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 KDF1Q8NAX2 398 aaPredicted RBP14.77□□□□□ -0.05
CCDC40-208ENST00000572270 IER2Q9BTL4 223 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 GCOM2Q9BZD3 368 aaPredicted RBP14.77□□□□□ -0.05
CCDC40-208ENST00000572270 FAM105AQ9NUU6 356 aa14.77□□□□□ -0.05
CCDC40-208ENST00000572270 PIN4Q9Y237 131 aaKnown RBP14.77□□□□□ -0.05
CCDC40-208ENST00000572270 CEP295Q9C0D2 2601 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 MEIS3P2A8K0S8 358 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 NRP1O14786 923 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 B4GALT3O60512 393 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 C1RP00736 705 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 TDGF1P13385 188 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 SFPQP23246 707 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCDC40-208ENST00000572270 CCR3P51677 355 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 C12orf50Q8NA57 414 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-208ENST00000572270 FAM167AQ96KS9 214 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 LZTS2Q9BRK4 669 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 LY9Q9HBG7 655 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 RXFP1Q9HBX9 757 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 SENP2Q9HC62 589 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 DIAPH3Q9NSV4 1193 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 KANSL3Q9P2N6 904 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-208ENST00000572270 ZFYVE26Q68DK2 2539 aa14.76□□□□□ -0.05
CCDC40-208ENST00000572270 CNOT1A5YKK6 2376 aaKnown RBP14.76□□□□□ -0.05
CCDC40-208ENST00000572270 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 TGM5O43548 720 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 CSDE1O75534 798 aaKnown RBP14.75□□□□□ -0.05
CCDC40-208ENST00000572270 DDHD2O94830 711 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 SMARCA1P28370 1054 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 ZNF76P36508 570 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 GRASPQ7Z6J2 395 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-208ENST00000572270 KXD1Q9BQD3 176 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 CHRDQ9H2X0 955 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 LHX6Q9UPM6 363 aa14.75□□□□□ -0.05
CCDC40-208ENST00000572270 PRG3Q9Y2Y8 225 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-208ENST00000572270 ZNF623O75123 536 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 GNAQP50148 359 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 DSG1Q02413 1049 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
CCDC40-208ENST00000572270 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 FGF13Q92913 245 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 MAP3K14Q99558 947 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 RSAD1Q9HA92 442 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 HEBP1Q9NRV9 189 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC40-208ENST00000572270 NDRG2Q9UN36 371 aaKnown RBP14.74□□□□□ -0.05
CCDC40-208ENST00000572270 GREB1Q4ZG55 1949 aa14.74□□□□□ -0.05
CCDC40-208ENST00000572270 MEIS1O00470 390 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 ZMYND10O75800 440 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 PSAPP07602 524 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 CNR2P34972 360 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 OR1G1P47890 313 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 CDC42EP1Q00587 391 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 CREMQ03060 361 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 MAMSTRQ6ZN01 415 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 PGBD1Q96JS3 809 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 INO80BQ9C086 356 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-208ENST00000572270 MARCH5Q9NX47 278 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
CCDC40-208ENST00000572270 CNTNAP2Q9UHC6 1331 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 HIP1O00291 1037 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 MAN2B1O00754 1011 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 TM4SF5O14894 197 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 DDAH1O94760 285 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 KCNK5O95279 499 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 FOSP01100 380 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-208ENST00000572270 POMCP01189 267 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 NTHL1P78549 312 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 RING1Q06587 406 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 FZD5Q13467 585 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 LIN9Q5TKA1 542 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-208ENST00000572270 CEP68Q76N32 757 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 NIPA1Q7RTP0 329 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 CATSPER4Q7RTX7 472 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 HEATR3Q7Z4Q2 680 aa14.72□□□□□ -0.05
CCDC40-208ENST00000572270 PLA2G4DQ86XP0 818 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms