RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 PDE2AO00408 941 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 GGPS1O95749 300 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 HSPA9P38646 679 aaKnown RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 PSMD6Q15008 389 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 SEPT14Q6ZU15 432 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 PACS2Q86VP3 889 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 RFX6Q8HWS3 928 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 HAUS1Q96CS2 278 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 DDX23Q9BUQ8 820 aaKnown RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 EHD4Q9H223 541 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 SCOCQ9UIL1 159 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 FLT1P17948 1338 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 A0A0G2JND7 137 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 SLC37A4O43826 429 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 ABL1P00519 1130 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 MYBP10242 640 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 RFX1P22670 979 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 ARL1P40616 181 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 FMO5P49326 533 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 CREG2Q8IUH2 290 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 MORC4Q8TE76 937 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 FAM167BQ9BTA0 163 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 TRIM4Q9C037 500 aa11.9□□□□□ -0.5
PCDHGA4-201ENST00000571252 ZNF233A6NK53 670 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 SLC16A3O15427 465 aaKnown RBP11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 IRX4P78413 519 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 TUBB6Q9BUF5 446 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 ATRNO75882 1429 aa11.9□□□□□ -0.51
PCDHGA4-201ENST00000571252 CCT8L1PA6NM43 557 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 TNNC2P02585 160 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 VEGFAP15692 232 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 KRT17Q04695 432 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 NR1H3Q13133 447 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPATA21Q7Z572 469 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 SAAL1Q96ER3 474 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 CD248Q9HCU0 757 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 PHF2O75151 1096 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 TRPM8Q7Z2W7 1104 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 KIAA0895Q8NCT3 520 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 USP15Q9Y4E8 981 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 ALG6Q9Y672 507 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 SLC16A4O15374 487 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 EIF2AK2P19525 551 aaKnown RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 COPB2P35606 906 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 MAP3K21Q5TCX8 1036 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 PPP1R2P3Q6NXS1 205 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 MIPOL1Q8TD10 442 aa11.89□□□□□ -0.51
PCDHGA4-201ENST00000571252 M0QZ92 97 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 MCF2LO15068 1137 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 MSL3Q8N5Y2 521 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SNF8Q96H20 258 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TRIM55Q9BYV6 548 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SCINQ9Y6U3 715 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 PITPNM2Q9BZ72 1349 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 WNT7AO00755 349 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TJP3O95049 919 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SYF2O95926 243 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 P4HA1P13674 534 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CD58P19256 250 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SERPINB6P35237 376 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 KCNJ1P48048 391 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 LONRF1Q17RB8 773 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CYB5D1Q6P9G0 228 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPDL1Q96EA4 605 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CARD9Q9H257 536 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TMBIM4Q9HC24 238 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 DCTN4Q9UJW0 460 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 COL18A1P39060 1754 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 EIF4E1BA6NMX2 242 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 GYG2O15488 501 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 POLE2P56282 527 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms