RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ATP2C1P98194 919 aaPredicted RBP6□□□□□ -1.45
CHD3-212ENST00000570758 CUL4AQ13619 759 aa6□□□□□ -1.45
CHD3-212ENST00000570758 PDIA5Q14554 519 aa6□□□□□ -1.45
CHD3-212ENST00000570758 DUSP6Q16828 381 aa6□□□□□ -1.45
CHD3-212ENST00000570758 CSPP1Q1MSJ5 1256 aa6□□□□□ -1.45
CHD3-212ENST00000570758 PLPP4Q5VZY2 271 aa6□□□□□ -1.45
CHD3-212ENST00000570758 HAUS3Q68CZ6 603 aa6□□□□□ -1.45
CHD3-212ENST00000570758 CDCA2Q69YH5 1023 aaPredicted RBP6□□□□□ -1.45
CHD3-212ENST00000570758 PADI6Q6TGC4 694 aa6□□□□□ -1.45
CHD3-212ENST00000570758 GLB1LQ6UWU2 654 aa6□□□□□ -1.45
CHD3-212ENST00000570758 KCNK18Q7Z418 384 aa6□□□□□ -1.45
CHD3-212ENST00000570758 CDR2LQ86X02 465 aaPredicted RBP6□□□□□ -1.45
CHD3-212ENST00000570758 ZNF280BQ86YH2 543 aa6□□□□□ -1.45
CHD3-212ENST00000570758 EFHBQ8N7U6 833 aa6□□□□□ -1.45
CHD3-212ENST00000570758 MCPH1Q8NEM0 835 aa6□□□□□ -1.45
CHD3-212ENST00000570758 SNX29Q8TEQ0 813 aa6□□□□□ -1.45
CHD3-212ENST00000570758 KHSRPQ92945 711 aaKnown RBP eCLIP6□□□□□ -1.45
CHD3-212ENST00000570758 PGBD4Q96DM1 585 aa6□□□□□ -1.45
CHD3-212ENST00000570758 MSLNLQ96KJ4 702 aa6□□□□□ -1.45
CHD3-212ENST00000570758 TCF25Q9BQ70 676 aa6□□□□□ -1.45
CHD3-212ENST00000570758 MMTAG2Q9BU76 263 aaKnown RBP6□□□□□ -1.45
CHD3-212ENST00000570758 KIFC3Q9BVG8 833 aa6□□□□□ -1.45
CHD3-212ENST00000570758 APOL6Q9BWW8 343 aa6□□□□□ -1.45
CHD3-212ENST00000570758 MRPL9Q9BYD2 267 aaKnown RBP6□□□□□ -1.45
CHD3-212ENST00000570758 NFKBIZQ9BYH8 718 aa6□□□□□ -1.45
CHD3-212ENST00000570758 GBP3Q9H0R5 595 aa6□□□□□ -1.45
CHD3-212ENST00000570758 RNF39Q9H2S5 420 aa6□□□□□ -1.45
CHD3-212ENST00000570758 TLE6Q9H808 572 aa6□□□□□ -1.45
CHD3-212ENST00000570758 RSAD1Q9HA92 442 aa6□□□□□ -1.45
CHD3-212ENST00000570758 DDX19AQ9NUU7 478 aaKnown RBP6□□□□□ -1.45
CHD3-212ENST00000570758 TBC1D13Q9NVG8 400 aa6□□□□□ -1.45
CHD3-212ENST00000570758 MIOSQ9NXC5 875 aa6□□□□□ -1.45
CHD3-212ENST00000570758 CLEC1BQ9P126 229 aa6□□□□□ -1.45
CHD3-212ENST00000570758 DNAJB4Q9UDY4 337 aa6□□□□□ -1.45
CHD3-212ENST00000570758 LRWD1Q9UFC0 647 aa6□□□□□ -1.45
CHD3-212ENST00000570758 KIAA1024Q9UPX6 916 aa6□□□□□ -1.45
CHD3-212ENST00000570758 LZTS1Q9Y250 596 aa6□□□□□ -1.45
CHD3-212ENST00000570758 USP20Q9Y2K6 914 aa6□□□□□ -1.45
CHD3-212ENST00000570758 KIF3AQ9Y496 699 aa6□□□□□ -1.45
CHD3-212ENST00000570758 HES2Q9Y543 173 aa6□□□□□ -1.45
CHD3-212ENST00000570758 IPPQ9Y573 584 aa6□□□□□ -1.45
CHD3-212ENST00000570758 E9PMD0 336 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 MBTPS2O43462 519 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 ZC3H11AO75152 810 aaKnown RBP eCLIP5.99□□□□□ -1.45
CHD3-212ENST00000570758 NPTXRO95502 500 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 EYA4O95677 639 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 POMCP01189 267 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 EDN1P05305 212 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 ITGA4P13612 1032 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 MUTP22033 750 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PPM1AP35813 382 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PRPHP41219 470 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 NAMPTP43490 491 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 NDUFV1P49821 464 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 KRT17Q04695 432 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 RNASELQ05823 741 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 SMAD4Q13485 552 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 KCNC3Q14003 757 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 FAM187BQ17R55 369 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PUS10Q3MIT2 529 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 RILPL1Q5EBL4 403 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 EEF1DP3Q658K8 133 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PDE12Q6L8Q7 609 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 NOTUMQ6P988 496 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 DTHD1Q6ZMT9 781 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PPP4R3CPQ6ZMV5 832 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 FAM178BQ8IXR5 827 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 DAW1Q8N136 415 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 URGCPQ8TCY9 931 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 AUTS2Q8WXX7 1259 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PPP2R3CQ969Q6 453 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 CCDC51Q96ER9 411 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PNMA5Q96PV4 448 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 GAD1Q99259 594 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 RUSC1Q9BVN2 902 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 VN1R3Q9BXE9 311 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 CSRNP2Q9H175 543 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 BHMT2Q9H2M3 363 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 FZD8Q9H461 694 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 NXF3Q9H4D5 531 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 ENTPD7Q9NQZ7 604 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 PUF60Q9UHX1 559 aaKnown RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 CD207Q9UJ71 328 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 BARX2Q9UMQ3 279 aaPredicted RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.99□□□□□ -1.45
CHD3-212ENST00000570758 REV3LO60673 3130 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 TRANK1O15050 2925 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 CNTNAP2Q9UHC6 1331 aa5.99□□□□□ -1.45
CHD3-212ENST00000570758 A0A1B0GUA9 196 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 VWA3AA6NCI4 1184 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 C2orf71A6NGG8 1288 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 ARL5CA6NH57 179 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 F8W810 466 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 LAD1O00515 517 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 NRP1O14786 923 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 INPPL1O15357 1258 aa5.98□□□□□ -1.45
CHD3-212ENST00000570758 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
CHD3-212ENST00000570758 CXCL14O95715 111 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms