RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 SRPK3Q9UPE1 567 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 SMC3Q9UQE7 1217 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 ZDHHC9Q9Y397 364 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 PCDHA8Q9Y5H6 950 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 PPLO60437 1756 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 NWD1Q149M9 1564 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 NPC1L1Q9UHC9 1359 aa4.52□□□□□ -1.69
CDC27-211ENST00000570740 NEXMIFQ5QGS0 1516 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 KDM2BQ8NHM5 1336 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 ZNF335Q9H4Z2 1342 aaPredicted RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 LAMC1P11047 1609 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 NPEPPSL1A6NEC2 478 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 C1QTNF3-AMACRE9PGA6 284 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 KIF2AO00139 706 aaPredicted RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 B4GALT4O60513 344 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 AMY2AP04746 511 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 PYGMP11217 842 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 PTPN1P18031 435 aaKnown RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 AMY2BP19961 511 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 RDXP35241 583 aaKnown RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 PEX19P40855 299 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 MAGEA8P43361 318 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 RWDD2BP57060 319 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 GUCY1A3Q02108 690 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 DBPQ10586 325 aaPredicted RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 PDCD2Q16342 344 aaPredicted RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 ZSCAN26Q16670 478 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 ZC3H12BQ5HYM0 836 aaKnown RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 BTBD8Q5XKL5 378 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 ARHGAP36Q6ZRI8 547 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 CLEC17AQ6ZS10 378 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 Q6ZUG5 572 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 C16orf59Q7L2K0 433 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 HSCBQ8IWL3 235 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 SDR16C5Q8N3Y7 309 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 CHST13Q8NET6 341 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 ZNF397Q8NF99 534 aaPredicted RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 TCP11Q8WWU5 503 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 AJUBAQ96IF1 538 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 DEPDC7Q96QD5 511 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 CPSF2Q9P2I0 782 aaKnown RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 CTNNA3Q9UI47 895 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 MRPS23Q9Y3D9 190 aaKnown RBP4.51□□□□□ -1.69
CDC27-211ENST00000570740 ADAMTS13Q76LX8 1427 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 LRRC7Q96NW7 1537 aa4.51□□□□□ -1.69
CDC27-211ENST00000570740 MYOM2P54296 1465 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 IFT172Q9UG01 1749 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 DCCP43146 1447 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 FAM90A27PA6NNH2 459 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 MYO1CO00159 1063 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 MAN2B1O00754 1011 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 GPR42O15529 346 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 TUBB4AP04350 444 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 PDE6AP16499 860 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 ZNF20P17024 532 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 U2AF2P26368 475 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDC27-211ENST00000570740 CSF2RBP32927 897 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 ADCY2Q08462 1091 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 TMED1Q13445 227 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDC27-211ENST00000570740 RBBP5Q15291 538 aaKnown RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 FIGNQ5HY92 759 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 SLFN13Q68D06 897 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 MMS22LQ6ZRQ5 1243 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 EP400NLQ6ZTU2 488 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 OSTM1Q86WC4 334 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 CIR1Q86X95 450 aaPredicted RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 REXO1L1PQ8IX06 675 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 IQUBQ8NA54 791 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 KIF18AQ8NI77 898 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 GOLGA5Q8TBA6 731 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 DVL3Q92997 716 aaPredicted RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 KISS1RQ969F8 398 aaPredicted RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 UTP14AQ9BVJ6 771 aaKnown RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 UBA5Q9GZZ9 404 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 KATNBL1Q9H079 304 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 SLC39A2Q9NP94 309 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 CATSPERZQ9NTU4 200 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 SPTLC3Q9NUV7 552 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 SNTG2Q9NY99 539 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 PSD3Q9NYI0 1048 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 MAGEC2Q9UBF1 373 aaPredicted RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 ST6GALNAC2Q9UJ37 374 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 CBLCQ9ULV8 474 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 TMA7Q9Y2S6 64 aaKnown RBP4.5□□□□□ -1.69
CDC27-211ENST00000570740 ATP23Q9Y6H3 246 aa4.5□□□□□ -1.69
CDC27-211ENST00000570740 NRXN1Q9ULB1 1477 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.49□□□□□ -1.69
CDC27-211ENST00000570740 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 H0Y858 1186 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 ZNF561-AS1K7EIQ3 104 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 GSTA4O15217 222 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 PPFIA2O75334 1257 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 SMC2O95347 1197 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 CRTAMO95727 393 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 SRGAP2CP0DJJ0 459 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 ABCD1P33897 745 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 GJA4P35212 333 aa4.49□□□□□ -1.69
CDC27-211ENST00000570740 PRPHP41219 470 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms