RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 HELQQ8TDG4 1101 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 ATXN2LQ8WWM7 1075 aaKnown RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 LPPQ93052 612 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 IFT74Q96LB3 600 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 TIPINQ9BVW5 301 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 B4GALT5O43286 388 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 HIP1RO75146 1068 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 OFD1O75665 1012 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 EFNA5P52803 228 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 UBE3AQ05086 875 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 MAPK7Q13164 816 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 SLC39A14Q15043 492 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 SKIV2LQ15477 1246 aaKnown RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 MAPK6Q16659 721 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 LONRF3Q496Y0 759 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 KCNT2Q6UVM3 1135 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 DEPTORQ8TB45 409 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 USP28Q96RU2 1077 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 PLIN2Q99541 437 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 NSUN3Q9H649 340 aaKnown RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 C17orf75Q9HAS0 396 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 COG5Q9UP83 839 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 IPPQ9Y573 584 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
SMG6-206ENST00000570668 CNTNAP2Q9UHC6 1331 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
SMG6-206ENST00000570668 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 ACKR2O00590 384 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 FGF18O76093 207 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 DNAJB1P25685 340 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 MARCKSP29966 332 aaPredicted RBP12.3□□□□□ -0.44
SMG6-206ENST00000570668 PPM1AP35813 382 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
SMG6-206ENST00000570668 PLCB3Q01970 1234 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
SMG6-206ENST00000570668 NOMO2Q5JPE7 1267 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 POF1BQ8WVV4 589 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 NTPCRQ9BSD7 190 aaKnown RBP12.3□□□□□ -0.44
SMG6-206ENST00000570668 KIFC3Q9BVG8 833 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 RSAD1Q9HA92 442 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 TBC1D13Q9NVG8 400 aa12.3□□□□□ -0.44
SMG6-206ENST00000570668 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SMG6-206ENST00000570668 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 INPPL1O15357 1258 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMG6-206ENST00000570668 PRKCBP05771 671 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 ZSCAN22P10073 491 aaPredicted RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 ITGA4P13612 1032 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 PLCG1P19174 1290 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 NPTX2P47972 431 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 PEX3P56589 373 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 TCEAL5Q5H9L2 206 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 USP49Q70CQ1 688 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 CDR2LQ86X02 465 aaPredicted RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 THNSL1Q8IYQ7 743 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 HLA-CQ95604 372 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 EPSTI1Q96J88 318 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 ASB2Q96Q27 587 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 SPG21Q9NZD8 308 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 ARHGAP28Q9P2N2 729 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 KANSL3Q9P2N6 904 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 LZTS1Q9Y250 596 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
SMG6-206ENST00000570668 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
SMG6-206ENST00000570668 PLXNA4Q9HCM2 1894 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms