RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CTSHP09668 335 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 LIG4P49917 911 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 SRGAP1Q7Z6B7 1085 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 ZNF710Q8N1W2 664 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 SRRTQ9BXP5 876 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 MRPL4Q9BYD3 311 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 SAMSN1Q9NSI8 373 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 PRMT7Q9NVM4 692 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 TRPV2Q9Y5S1 764 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 SIP14410 1827 aa16.9■□□□□ 0.3
HERPUD1-219ENST00000570273 KIAA0100Q14667 2235 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 TISP43B9A030 160 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 CLIC2O15247 247 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 B4GALT4O60513 344 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 NR3C1P04150 777 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 EDN1P05305 212 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 NR2F2P24468 414 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 THPOP40225 353 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 UVSSAQ2YD98 709 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 FZD8Q9H461 694 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 CDY2AQ9Y6F7 541 aa16.89■□□□□ 0.29
HERPUD1-219ENST00000570273 ANKRD63C9JTQ0 380 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CETN3O15182 167 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 PIGRP01833 764 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 DARSP14868 501 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 RPL13P26373 211 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 MRE11P49959 708 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CDK7P50613 346 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CYP2J2P51589 502 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CRYBB1P53674 252 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 SNRPFP62306 86 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 ARMCX5Q6P1M9 558 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 FAM114A1Q8IWE2 563 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 EEF2KMTQ96G04 330 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 TARS2Q9BW92 718 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CELF4Q9BZC1 486 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 MAGEC2Q9UBF1 373 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 USP20Q9Y2K6 914 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 TRIP12Q14669 1992 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
HERPUD1-219ENST00000570273 ACKR2O00590 384 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 PQBP1O60828 265 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ERLIN2O94905 339 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 COL6A1P12109 1028 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ZNF18P17022 549 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CAPN2P17655 700 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 PLCB2Q00722 1185 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ADAM9Q13443 819 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 SNX17Q15036 470 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 NFIL3Q16649 462 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CDKAL1Q5VV42 579 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 SLC39A4Q6P5W5 647 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ZPBP2Q6X784 338 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 FAM126BQ8IXS8 530 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CBWD1Q9BRT8 395 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 C11orf49Q9H6J7 331 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CNTNAP2Q9UHC6 1331 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 B4GALT5O43286 388 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CAND2O75155 1236 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ATP1A3P13637 1013 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CDK11BP21127 795 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 FGFR4P22455 802 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 SFPQP23246 707 aaKnown RBP eCLIP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 SPAG1Q07617 926 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 MGAT3Q09327 533 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CATSPER4Q7RTX7 472 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 ACO2Q99798 780 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 PCIF1Q9H4Z3 704 aa16.87■□□□□ 0.29
HERPUD1-219ENST00000570273 TTLL13PA6NNM8 815 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 KCNJ18B7U540 433 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms