RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	CTNNB1	P35222	781 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	SLC12A3	P55017	1021 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	KRT85	P78386	507 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	AMPD3	Q01432	767 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	UBE3A	Q05086	875 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	STRN3	Q13033	797 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	SPOUT1	Q5T280	376 aa	Known RBP	19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	SYMPK	Q92797	1274 aa	Known RBP	19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	SCAND2P	Q9GZW5	306 aa	Predicted RBP	19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	MAGEF1	Q9HAY2	307 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	GPRC5C	Q9NQ84	441 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	KMT5A	Q9NQR1	393 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	FAM13B	Q9NYF5	915 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150		A0A087WWV3	80 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	CCDC169	A6NNP5	214 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	DLL1	O00548	723 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	NCK2	O43639	380 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	HIP1R	O75146	1068 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	TBCA	O75347	108 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	CSDE1	O75534	798 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	PLCG1	P19174	1290 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	NCL	P19338	710 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	FGFR4	P22455	802 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	HOXA11	P31270	313 aa	Predicted RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	PDE12	Q6L8Q7	609 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	SV2B	Q7L1I2	683 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	MRPL10	Q7Z7H8	261 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	ZNF598	Q86UK7	904 aa	Known RBP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	SPRYD3	Q8NCJ5	442 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	RNF169	Q8NCN4	708 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	KCNN1	Q92952	543 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	MINDY3	Q9H8M7	445 aa		19.83	■□□□□ 0.77
PKD1-238	ENST00000570150	EYS	Q5T1H1	3165 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	ARID2	Q68CP9	1835 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	PRKCB	P05771	671 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	STAT6	P42226	847 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	NPTX2	P47972	431 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	ME1	P48163	572 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	KARS	Q15046	597 aa	Known RBP	19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	DCAF4L1	Q3SXM0	396 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	TIGD5	Q53EQ6	642 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	FAM173B	Q6P4H8	233 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	GPBP1	Q86WP2	473 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	IQUB	Q8NA54	791 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	PARVG	Q9HBI0	331 aa		19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	PUF60	Q9UHX1	559 aa	Known RBP	19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	19.82	■□□□□ 0.76
PKD1-238	ENST00000570150	NR1I2	O75469	434 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	ITGA4	P13612	1032 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	ARF4	P18085	180 aa	Predicted RBP	19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	ALDH7A1	P49419	539 aa	Known RBP	19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	PEX3	P56589	373 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	KRT17	Q04695	432 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	GPM6B	Q13491	265 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	MRPL38	Q96DV4	380 aa	Known RBP	19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	EPSTI1	Q96J88	318 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	RUSC1	Q9BVN2	902 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	MRPL4	Q9BYD3	311 aa	Known RBP	19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	RSAD1	Q9HA92	442 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	SEL1L	Q9UBV2	794 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	GIT1	Q9Y2X7	761 aa		19.81	■□□□□ 0.76
PKD1-238	ENST00000570150	UNC80	Q8N2C7	3258 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	FAM13A	O94988	1023 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	RNASEL	Q05823	741 aa	Known RBP	19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	AMHR2	Q16671	573 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	NOMO2	Q5JPE7	1267 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	KCNK18	Q7Z418	384 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	CCDC34	Q96HJ3	373 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	ZNF558	Q96NG5	402 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	FAM193B	Q96PV7	902 aa	Predicted RBP	19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	PLIN2	Q99541	437 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	C17orf80	Q9BSJ5	609 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	ARHGAP28	Q9P2N2	729 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	TFIP11	Q9UBB9	837 aa	Known RBP	19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	RCOR1	Q9UKL0	485 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	MTUS1	Q9ULD2	1270 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	LZTS1	Q9Y250	596 aa		19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	MRPL42	Q9Y6G3	142 aa	Known RBP	19.8	■□□□□ 0.76
PKD1-238	ENST00000570150	MAPT	P10636	758 aa	Known RBP	19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	GAP43	P17677	238 aa		19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	IBSP	P21815	317 aa	Predicted RBP	19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	KYAT1	Q16773	422 aa		19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	PAN2	Q504Q3	1202 aa	Known RBP	19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	CASD1	Q96PB1	797 aa		19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	CCDC113	Q9H0I3	377 aa		19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	CERS4	Q9HA82	394 aa		19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	TYW1	Q9NV66	732 aa	Known RBP	19.79	■□□□□ 0.76
PKD1-238	ENST00000570150	INPPL1	O15357	1258 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	FGFR1	P11362	822 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	ANP32A	P39687	249 aa	Known RBP	19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	ZNF131	P52739	623 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	ALCAM	Q13740	583 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	AAK1	Q2M2I8	961 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	FOXD4L5	Q5VV16	416 aa	Predicted RBP	19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	STXBP4	Q6ZWJ1	553 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	MYCT1	Q8N699	235 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	SPATA32	Q96LK8	384 aa		19.78	■□□□□ 0.76
PKD1-238	ENST00000570150	CLIC6	Q96NY7	704 aa		19.78	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms