RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 MGEA5O60502 916 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 SCP2P22307 547 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 ABCD1P33897 745 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 DEFB103AP81534 67 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 SNW1Q13573 536 aaKnown RBP14.37□□□□□ -0.11
CNOT1-217ENST00000569263 FAM187BQ17R55 369 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 RASIP1Q5U651 963 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 CNNM4Q6P4Q7 775 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
CNOT1-217ENST00000569263 UNC13DQ70J99 1090 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 HAUS6Q7Z4H7 955 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 TMEM161BQ8NDZ6 487 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 ENGASEQ8NFI3 743 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 CCDC47Q96A33 483 aaKnown RBP14.37□□□□□ -0.11
CNOT1-217ENST00000569263 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 TIGD1Q96MW7 591 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
CNOT1-217ENST00000569263 FZD8Q9H461 694 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 RGS18Q9NS28 235 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-217ENST00000569263 TBC1D7Q9P0N9 293 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
CNOT1-217ENST00000569263 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 ACKR2O00590 384 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 ENPP3O14638 875 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 B4GALT5O43286 388 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 UPP2O95045 317 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 GCNT3O95395 438 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 MAPTP10636 758 aaKnown RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 ARF4P18085 180 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 NMT1P30419 496 aaKnown RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 RAB27AP51159 221 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 DSC3Q14574 896 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 POSTNQ15063 836 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 AMHR2Q16671 573 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 SLC24A5Q71RS6 500 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 CCDC51Q96ER9 411 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 BICD1Q96G01 975 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
CNOT1-217ENST00000569263 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 LRFN2Q9ULH4 789 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 TTC3P53804 2025 aa14.36□□□□□ -0.11
CNOT1-217ENST00000569263 PVALEFA0A1B0GWK0 134 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 N4BP3O15049 544 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 STAG3L1P0CL83 205 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 ALCAMQ13740 583 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 FAM26FQ5R3K3 315 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 FAM117BQ6P1L5 589 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 TAS1R3Q7RTX0 852 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 RTN4RL1Q86UN2 441 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-217ENST00000569263 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 HVCN1Q96D96 273 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 TRIM6Q9C030 488 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-217ENST00000569263 LMBRD1Q9NUN5 540 aa14.35□□□□□ -0.11
CNOT1-217ENST00000569263 C9IYK1 514 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 RPN1P04843 607 aaKnown RBP14.34□□□□□ -0.11
CNOT1-217ENST00000569263 EDN1P05305 212 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 SKIP12755 728 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 HOXA11P31270 313 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-217ENST00000569263 DPYDQ12882 1025 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 PNOCQ13519 176 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-217ENST00000569263 ATF7IP2Q5U623 682 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 SLC27A1Q6PCB7 646 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 ZNF720Q7Z2F6 126 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 APBB1IPQ7Z5R6 666 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-217ENST00000569263 CDR2LQ86X02 465 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-217ENST00000569263 NPAS4Q8IUM7 802 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 HERC6Q8IVU3 1022 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 RNF169Q8NCN4 708 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 FIZ1Q96SL8 496 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 ST6GALNAC4Q9H4F1 302 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 FAM105AQ9NUU6 356 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 TBX20Q9UMR3 447 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 PCDHB7Q9Y5E2 793 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
CNOT1-217ENST00000569263 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 A0A1B0GUA9 196 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TTLL13PA6NNM8 815 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 HNRNPDLO14979 420 aaKnown RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 SMC2O95347 1197 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 NPTXRO95502 500 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 MATR3P43243 847 aaKnown RBP eCLIP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 LIG4P49917 911 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 GTF2BQ00403 316 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 ZNF568Q3ZCX4 644 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 KMT5BQ4FZB7 885 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms