RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	RSAD1	Q9HA92	442 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	TMEM260	Q9NX78	707 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	RNF7	Q9UBF6	113 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	KLRG2	A4D1S0	409 aa	Predicted RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	PRPF6	O94906	941 aa	Known RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	ABHD16A	O95870	558 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	JMJD7	P0C870	316 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	NPEPPS	P55786	919 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	ZNF460	Q14592	562 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	KRT40	Q6A162	431 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	ESRP1	Q6NXG1	681 aa	Known RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	C9orf106	Q8NAJ2	232 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	BEND2	Q8NDZ0	799 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	SREK1	Q8WXA9	508 aa	Known RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	MRFAP1L1	Q96HT8	127 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	ZNF512	Q96ME7	567 aa	Predicted RBP	5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	MNT	Q99583	582 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	TRPS1	Q9UHF7	1281 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	MAGEL2	Q9UJ55	1249 aa		5.06	□□□□□ -1.6
UBR1-209	ENST00000569243	B3GALT2	O43825	422 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	OPHN1	O60890	802 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	F2	P00734	622 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	POU3F3	P20264	500 aa	Predicted RBP	5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	ACAP1	Q15027	740 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	CCDC178	Q5BJE1	867 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	GPR158	Q5T848	1215 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	CREB3L3	Q68CJ9	461 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	FBXO42	Q6P3S6	717 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	KCNV1	Q6PIU1	500 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	UNC5B	Q8IZJ1	945 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	EFHB	Q8N7U6	833 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	SCARB1	Q8WTV0	552 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	ST8SIA2	Q92186	375 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	HIST1H2AH	Q96KK5	128 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	HIST1H2AJ	Q99878	128 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	MTG2	Q9H4K7	406 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	IFT57	Q9NWB7	429 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	OXSM	Q9NWU1	459 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	ZKSCAN5	Q9Y2L8	839 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	COL4A3	Q01955	1670 aa		5.05	□□□□□ -1.6
UBR1-209	ENST00000569243	MYADML2	A6NDP7	307 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	SLC9A1	P19634	815 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	CD40	P25942	277 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	GPR15	P49685	360 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	C1QL3	Q5VWW1	255 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	PASD1	Q8IV76	773 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	SH3TC2	Q8TF17	1288 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	ARL8A	Q96BM9	186 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	UIMC1	Q96RL1	719 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	SOX7	Q9BT81	388 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	MYL10	Q9BUA6	226 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	ENKD1	Q9H0I2	346 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	DNAI1	Q9UI46	699 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	FZD1	Q9UP38	647 aa		5.04	□□□□□ -1.6
UBR1-209	ENST00000569243	GRXCR1	A8MXD5	290 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	PPP1R12A	O14974	1030 aa	Predicted RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	HOXA3	O43365	443 aa	Predicted RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	ITGB1	P05556	798 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	GAA	P10253	952 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	ATP2A2	P16615	1042 aa	Known RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	GNAT2	P19087	354 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	SDS	P20132	328 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	WNT3A	P56704	352 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	MAPK7	Q13164	816 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	BMS1	Q14692	1282 aa	Known RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	TCEA2	Q15560	299 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	IQSEC1	Q6DN90	963 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	RSAD2	Q8WXG1	361 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	DNAJC2	Q99543	621 aa	Known RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	NOL10	Q9BSC4	688 aa	Known RBP	5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	ZMAT4	Q9H898	229 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	TOMM22	Q9NS69	142 aa		5.03	□□□□□ -1.6
UBR1-209	ENST00000569243	MYPN	Q86TC9	1320 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	TRIM24	O15164	1050 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	GAS7	O60861	476 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	RECQL4	O94761	1208 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	NR4A1	P22736	598 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	PHC1	P78364	1004 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	DSG1	Q02413	1049 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	TAP1	Q03518	808 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	WNT8A	Q9H1J5	351 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	POFUT1	Q9H488	388 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	CYP4F11	Q9HBI6	524 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	CLCA2	Q9UQC9	943 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	FRMD4B	Q9Y2L6	1034 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	PCDHB6	Q9Y5E3	794 aa		5.02	□□□□□ -1.61
UBR1-209	ENST00000569243	NRP2	O60462	931 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	ASMTL	O95671	621 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	OCRL	Q01968	901 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	UNQ6494/PRO21346	Q6UXR6	183 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	LRRC55	Q6ZSA7	311 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	ESPNL	Q6ZVH7	1005 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	DOK3	Q7L591	496 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms