RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ST7Q9NRC1 585 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 A0A0D9SFI3 127 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SLCO1B7G3V0H7 640 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 PDE9AO76083 593 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SMARCA1P28370 1054 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ZBTB41Q5SVQ8 909 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 HDDC2Q7Z4H3 204 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ERP44Q9BS26 406 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 WDR47O94967 919 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RARGP13631 454 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF12P17014 697 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 BLMHQ13867 455 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 NSMCE4AQ9NXX6 385 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SEL1LQ9UBV2 794 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 USTQ9Y2C2 406 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 STX5Q13190 355 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TAB1Q15750 504 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PPP1R2P1Q96PQ5 205 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 EML4Q9HC35 981 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 EURLQ9NYK6 297 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 F8VZ95 297 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CAPN9O14815 690 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ACSL3O95573 720 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 POLGP54098 1239 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 C21orf59P57076 290 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 KRT72Q14CN4 511 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 RCN1Q15293 331 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 RAPGEF5Q92565 580 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TBCCD1Q9NVR7 557 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TTC26A0AVF1 554 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 P4HA2O15460 535 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MYBL2P10244 700 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ELF3P78545 371 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ERGIC2Q96RQ1 377 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CFAP74Q9C0B2 1584 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 KIAA1586Q9HCI6 787 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 DDX25Q9UHL0 483 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 SLC24A2Q9UI40 661 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PCDHA12Q9UN75 941 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MRC2Q9UBG0 1479 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PDS5AQ29RF7 1337 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TRAPPC3O43617 180 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MYL4P12829 197 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 USP11P51784 963 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 GCKRQ14397 625 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MTHFSDQ2M296 383 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ARMCX4Q5H9R4 360 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MED14O60244 1454 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PLCH2O75038 1416 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 PHF20L1A8MW92 1017 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 VWA5AO00534 786 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 GUCY1B2O75343 617 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CALB1P05937 261 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 GSTT1P30711 240 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 SAMD1Q6SPF0 538 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TOM1L2Q6ZVM7 507 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 KIAA0825Q8IV33 1275 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 UHMK1Q8TAS1 419 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ACTRT1Q8TDG2 376 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 MRPL1Q9BYD6 325 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 NACA2Q9H009 215 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 VPS33BQ9H267 617 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 RPAP3Q9H6T3 665 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TM9SF1O15321 606 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 ATP9AO75110 1047 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 IL12AP29459 219 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 COPAP53621 1224 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 LRRC8EQ6NSJ5 796 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 TTC33Q6PID6 262 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-216ENST00000569240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.54□□□□□ -1.26e-7■■■■■ 139.2
CNOT1-216ENST00000569240 OMA1Q96E52 524 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 CTTNBP2Q8WZ74 1663 aa7.54□□□□□ -1.2
CNOT1-216ENST00000569240 B2RBV5 119 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 H7C0C1 242 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SNAPC5O75971 98 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 PAMP19021 973 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 SOX6P35712 828 aa7.53□□□□□ -1.2
CNOT1-216ENST00000569240 ATP5OP48047 213 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms