RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ADGRA3Q8IWK6 1321 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 CNTNAP2Q9UHC6 1331 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 TSPAN1O60635 241 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 SKIP12755 728 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 RAB27AP51159 221 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 COASYQ13057 564 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 SHHQ15465 462 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
CHD9-219ENST00000569225 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 KCNN1Q92952 543 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 HVCN1Q96D96 273 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 SLC9A7Q96T83 725 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 ADAM2Q99965 735 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 MRPL4Q9BYD3 311 aaKnown RBP10.03□□□□□ -0.8
CHD9-219ENST00000569225 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 ST6GALNAC4Q9H4F1 302 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 RGS18Q9NS28 235 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 RMND1Q9NWS8 449 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 PCDHB13Q9Y5F0 798 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 ENPP3O14638 875 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 N4BP3O15049 544 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 MBD3O95983 291 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 STAG3L1P0CL83 205 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 PTMSP20962 102 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.8
CHD9-219ENST00000569225 PSMD2Q13200 908 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 DSC3Q14574 896 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 AMHR2Q16671 573 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 FAM26FQ5R3K3 315 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 C9orf50Q5SZB4 431 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 RASIP1Q5U651 963 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 SLC24A5Q71RS6 500 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 HACE1Q8IYU2 909 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 BICD1Q96G01 975 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 GTPBP4Q9BZE4 634 aaKnown RBP10.02□□□□□ -0.8
CHD9-219ENST00000569225 EXOC7Q9UPT5 735 aa10.02□□□□□ -0.8
CHD9-219ENST00000569225 TRIP12Q14669 1992 aaPredicted RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 GCNT3O95395 438 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 RPN1P04843 607 aaKnown RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 ATP2A2P16615 1042 aaKnown RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 NMT1P30419 496 aaKnown RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 GTF2BQ00403 316 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 DPYDQ12882 1025 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 TCTN1Q2MV58 587 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 ZPBP2Q6X784 338 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 ADPGKQ9BRR6 497 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 TRIM6Q9C030 488 aaPredicted RBP10.02□□□□□ -0.81
CHD9-219ENST00000569225 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 TBC1D7Q9P0N9 293 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 LRFN2Q9ULH4 789 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 TBX20Q9UMR3 447 aa10.02□□□□□ -0.81
CHD9-219ENST00000569225 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.01□□□□□ -0.81
CHD9-219ENST00000569225 HNRNPDLO14979 420 aaKnown RBP10.01□□□□□ -0.81
CHD9-219ENST00000569225 B4GALT5O43286 388 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 KIF20AO95235 890 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 CASP1P29466 404 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 HOXA11P31270 313 aaPredicted RBP10.01□□□□□ -0.81
CHD9-219ENST00000569225 MCM4P33991 863 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 DCAF4L1Q3SXM0 396 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 NPAS4Q8IUM7 802 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 MAP4K3Q8IVH8 894 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 MYOCDQ8IZQ8 938 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 SMARCE1Q969G3 411 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 PGBD4Q96DM1 585 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 ACCSQ96QU6 501 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 FIZ1Q96SL8 496 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 ZBED2Q9BTP6 218 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 TMEM206Q9H813 350 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 CXXC1Q9P0U4 656 aaPredicted RBP10.01□□□□□ -0.81
CHD9-219ENST00000569225 TNFSF13BQ9Y275 285 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
CHD9-219ENST00000569225 UBE4BO95155 1302 aa10□□□□□ -0.81
CHD9-219ENST00000569225 A0A0U1RQF3 1178 aa10□□□□□ -0.81
CHD9-219ENST00000569225 C9IYK1 514 aa10□□□□□ -0.81
CHD9-219ENST00000569225 EIF3DO15371 548 aaKnown RBP eCLIP10□□□□□ -0.81
CHD9-219ENST00000569225 HOXA2O43364 376 aa10□□□□□ -0.81
CHD9-219ENST00000569225 MGEA5O60502 916 aa10□□□□□ -0.81
CHD9-219ENST00000569225 PRR29P0C7W0 189 aa10□□□□□ -0.81
CHD9-219ENST00000569225 LIG4P49917 911 aa10□□□□□ -0.81
CHD9-219ENST00000569225 FAM189BP81408 668 aa10□□□□□ -0.81
CHD9-219ENST00000569225 PNOCQ13519 176 aa10□□□□□ -0.81
CHD9-219ENST00000569225 KCNB1Q14721 858 aa10□□□□□ -0.81
CHD9-219ENST00000569225 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
CHD9-219ENST00000569225 L1TD1Q5T7N2 865 aaKnown RBP10□□□□□ -0.81
CHD9-219ENST00000569225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10□□□□□ -0.81
CHD9-219ENST00000569225 RTN4RL1Q86UN2 441 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 SYCP3Q8IZU3 236 aa10□□□□□ -0.81
CHD9-219ENST00000569225 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms