RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 VPS37AQ8NEZ2 397 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 FBXO18Q8NFZ0 1043 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 ZBTB8AQ96BR9 441 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 STRBPQ96SI9 672 aaKnown RBP7.27□□□□□ -1.24
UBR1-208ENST00000569066 TMEM60Q9H2L4 133 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.24
UBR1-208ENST00000569066 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 CARMIL2Q6F5E8 1435 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 ANO9A1A5B4 782 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 CUTAO60888 179 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 CTSSP25774 331 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 GPR15P49685 360 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 LONRF1Q17RB8 773 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 XRRA1Q6P2D8 792 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 SPICE1Q8N0Z3 855 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 MSL3Q8N5Y2 521 aaKnown RBP7.27□□□□□ -1.25
UBR1-208ENST00000569066 PIK3C3Q8NEB9 887 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 FAM168AQ92567 244 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 HOXB13Q92826 284 aaPredicted RBP7.27□□□□□ -1.25
UBR1-208ENST00000569066 HDAC10Q969S8 669 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 RBM12Q9NTZ6 932 aaKnown RBP7.27□□□□□ -1.25
UBR1-208ENST00000569066 STAP2Q9UGK3 403 aa7.27□□□□□ -1.25
UBR1-208ENST00000569066 ADCY6O43306 1168 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 AKR1B10O60218 316 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 PRAMEF4O60810 478 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 KNG1P01042 644 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 FTLP02792 175 aaPredicted RBP7.26□□□□□ -1.25
UBR1-208ENST00000569066 PHKG2P15735 406 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 KCNQ1P51787 676 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 KLHDC10Q6PID8 442 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 MIGA2Q7L4E1 593 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 FAM43AQ8N2R8 423 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 MZB1Q8WU39 189 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
UBR1-208ENST00000569066 CLIC6Q96NY7 704 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 HRKO00198 91 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 WNT10BO00744 389 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 SYN1P17600 705 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 XPAP23025 273 aaPredicted RBP7.26□□□□□ -1.25
UBR1-208ENST00000569066 PEX2P28328 305 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 TMEM200BQ69YZ2 307 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 PPP1R14CQ8TAE6 165 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 PTPRHQ9HD43 1115 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 L1RE1Q9UN81 338 aa7.26□□□□□ -1.25
UBR1-208ENST00000569066 A0A1W2PR48 441 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 PLA2G1BP04054 148 aaKnown RBP7.25□□□□□ -1.25
UBR1-208ENST00000569066 MAP3K12Q12852 859 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 SEMA5AQ13591 1074 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 SRGAP1Q7Z6B7 1085 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 NKD2Q969F2 451 aaPredicted RBP7.25□□□□□ -1.25
UBR1-208ENST00000569066 WDR92Q96MX6 357 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 GCM1Q9NP62 436 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 A0A0G2JNJ9 132 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
UBR1-208ENST00000569066 FOXO4P98177 505 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 CNN3Q15417 329 aaKnown RBP7.25□□□□□ -1.25
UBR1-208ENST00000569066 ANO6Q4KMQ2 910 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 RGMAQ96B86 450 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 DMRTA2Q96SC8 542 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 C7orf25Q9BPX7 421 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
UBR1-208ENST00000569066 Q9UFV3 132 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 STXBP5LQ9Y2K9 1186 aa7.25□□□□□ -1.25
UBR1-208ENST00000569066 H0Y858 1186 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 WASP42768 502 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 AGFG1P52594 562 aaKnown RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 RAB1AP62820 205 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 TARDBPQ13148 414 aaKnown RBP eCLIP7.24□□□□□ -1.25
UBR1-208ENST00000569066 TARBP2Q15633 366 aaKnown RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 CCDC178Q5BJE1 867 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 SRLQ86TD4 932 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 CELF5Q8N6W0 485 aaKnown RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 KYQ8NBH2 561 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 KLHDC4Q8TBB5 520 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 FBXO41Q8TF61 875 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 VRK1Q99986 396 aaPredicted RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 ELAC2Q9BQ52 826 aaKnown RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 PDCD2LQ9BRP1 358 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 ZMAT3Q9HA38 289 aaKnown RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 RSAD1Q9HA92 442 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 TLR9Q9NR96 1032 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 NRP2O60462 931 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 GAAP10253 952 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 NRG3P56975 720 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 ACAP1Q15027 740 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 CCDC157Q569K6 752 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 DAAM2Q86T65 1068 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.24□□□□□ -1.25
UBR1-208ENST00000569066 RTEL1Q9NZ71 1219 aa7.24□□□□□ -1.25
UBR1-208ENST00000569066 SAE1Q9UBE0 346 aaPredicted RBP7.24□□□□□ -1.25
UBR1-208ENST00000569066 ALDH5A1P51649 535 aaPredicted RBP7.23□□□□□ -1.25
UBR1-208ENST00000569066 UBE3CQ15386 1083 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 MST1LQ2TV78 715 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 TSHZ1Q6ZSZ6 1077 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 LARP4Q71RC2 724 aaKnown RBP eCLIP7.23□□□□□ -1.25
UBR1-208ENST00000569066 ZGPATQ8N5A5 531 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms