RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 H3BQ06 376 aaPredicted RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 NCK2O43639 380 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 EYA4O95677 639 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 GTF2F1P35269 517 aaKnown RBP eCLIP19.41■□□□□ 0.7
EDC3-215ENST00000569007 PPM1AP35813 382 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 PLCB3Q01970 1234 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 ZRSR1Q15695 479 aaKnown RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 ARL6IP4Q66PJ3 421 aaKnown RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 CDCA2Q69YH5 1023 aaPredicted RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 ADGRD2Q7Z7M1 963 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 SMG8Q8ND04 991 aaKnown RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 MICAL1Q8TDZ2 1067 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 NECAB3Q96P71 396 aaPredicted RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 UHRF1Q96T88 793 aaPredicted RBP19.41■□□□□ 0.7
EDC3-215ENST00000569007 IGFLR1Q9H665 355 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 TLR9Q9NR96 1032 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 TBC1D13Q9NVG8 400 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 CLDND1Q9NY35 253 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
EDC3-215ENST00000569007 K7ELQ4 463 aaPredicted RBP19.4■□□□□ 0.7
EDC3-215ENST00000569007 NCLP19338 710 aaKnown RBP19.4■□□□□ 0.7
EDC3-215ENST00000569007 BCAR1P56945 870 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 ERVFC1P60507 584 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 CTC1Q2NKJ3 1217 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 LEXMQ3ZCV2 418 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 KCNK18Q7Z418 384 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 ZBTB8OSQ8IWT0 167 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 SLC39A11Q8N1S5 342 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 MRPS27Q92552 414 aaKnown RBP19.4■□□□□ 0.7
EDC3-215ENST00000569007 PPP2R3CQ969Q6 453 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 INTS4Q96HW7 963 aaKnown RBP19.4■□□□□ 0.7
EDC3-215ENST00000569007 CSRNP2Q9H175 543 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 PUF60Q9UHX1 559 aaKnown RBP19.4■□□□□ 0.7
EDC3-215ENST00000569007 LZTS1Q9Y250 596 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 IPPQ9Y573 584 aa19.4■□□□□ 0.7
EDC3-215ENST00000569007 NT5C1B-RDH14C9J2C7 533 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 ZC3H11AO75152 810 aaKnown RBP eCLIP19.39■□□□□ 0.69
EDC3-215ENST00000569007 ITGA4P13612 1032 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 SYT1P21579 422 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 LTBRP36941 435 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 NAMPTP43490 491 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 ALDH7A1P49419 539 aaKnown RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 AFF1P51825 1210 aaKnown RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 KRT17Q04695 432 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 PPP4R3CPQ6ZMV5 832 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 CDR2LQ86X02 465 aaPredicted RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 CNNM3Q8NE01 707 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 URGCPQ8TCY9 931 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 KIFAP3Q92845 792 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 GBP3Q9H0R5 595 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 C2orf40Q9H1Z8 148 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 RNF39Q9H2S5 420 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 FZD8Q9H461 694 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 PRMT7Q9NVM4 692 aaPredicted RBP19.39■□□□□ 0.69
EDC3-215ENST00000569007 HES2Q9Y543 173 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 CNTNAP2Q9UHC6 1331 aa19.39■□□□□ 0.69
EDC3-215ENST00000569007 A0A1B0GUA9 196 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 LINC01565O15544 149 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 BMP15O95972 392 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 NRIP1P48552 1158 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 PPP2R5AQ15172 486 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 HYIQ5T013 277 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 RBM23Q86U06 439 aaKnown RBP19.38■□□□□ 0.69
EDC3-215ENST00000569007 DEPTORQ8TB45 409 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 IFT74Q96LB3 600 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 PNMA5Q96PV4 448 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 PLIN2Q99541 437 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 KIFC3Q9BVG8 833 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 RUSC1Q9BVN2 902 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 TRIM6Q9C030 488 aaPredicted RBP19.38■□□□□ 0.69
EDC3-215ENST00000569007 NRDE2Q9H7Z3 1164 aa19.38■□□□□ 0.69
EDC3-215ENST00000569007 TTLL13PA6NNM8 815 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 FSCN2O14926 492 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 B4GALT3O60512 393 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 NPTXRO95502 500 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 LIG1P18858 919 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 DLX2Q07687 328 aaPredicted RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 ADAM15Q13444 863 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 MAPK6Q16659 721 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 FAM187BQ17R55 369 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 PLPP4Q5VZY2 271 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 PTCRAQ6ISU1 281 aaPredicted RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 PDE12Q6L8Q7 609 aaKnown RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 SLC27A1Q6PCB7 646 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 TMEM173Q86WV6 379 aaPredicted RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 ZNF280BQ86YH2 543 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 TCF25Q9BQ70 676 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 APOL6Q9BWW8 343 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 NXF3Q9H4D5 531 aaKnown RBP19.37■□□□□ 0.69
EDC3-215ENST00000569007 TLE6Q9H808 572 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 UBN1Q9NPG3 1134 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 ENTPD7Q9NQZ7 604 aa19.37■□□□□ 0.69
EDC3-215ENST00000569007 DNAJB4Q9UDY4 337 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms