RNA–Protein interactions for RNA: ENST00000568615.2

PSMD7-205, Transcript of proteasome 26S subunit, non-ATPase 7, human

TSL 2 BASIC

Gene PSMD7, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD7-205	ENST00000568615	SMAD3	P84022	425 aa	Known RBP	13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	FAM160A1	Q05DH4	1040 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	SNW1	Q13573	536 aa	Known RBP	13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	HERC6	Q8IVU3	1022 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	ENGASE	Q8NFI3	743 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	CCDC51	Q96ER9	411 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	PAGE5	Q96GU1	130 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	FIZ1	Q96SL8	496 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	RNF216	Q9NWF9	866 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	MTMR10	Q9NXD2	777 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	STXBP5L	Q9Y2K9	1186 aa		13.93	□□□□□ -0.18
PSMD7-205	ENST00000568615	ARID2	Q68CP9	1835 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615		A0A0U1RQF3	1178 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615		A0A1B0GUA9	196 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615		K7ERI5	159 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	B4GALT5	O43286	388 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	GADD45B	O75293	160 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	GJB5	O95377	273 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	PRKCB	P05771	671 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	ARF4	P18085	180 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	ABCD1	P33897	745 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	PRPF4B	Q13523	1007 aa	Known RBP	13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	TPRN	Q4KMQ1	711 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	NOTUM	Q6P988	496 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	KRBA2	Q6ZNG9	492 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	TAS1R3	Q7RTX0	852 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	NPAS4	Q8IUM7	802 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	FAM178B	Q8IXR5	827 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	CCDC65	Q8IXS2	484 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	MYOCD	Q8IZQ8	938 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	CNNM3	Q8NE01	707 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	ST6GALNAC4	Q9H4F1	302 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	ZHX3	Q9H4I2	956 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	ELAC1	Q9H777	363 aa	Known RBP	13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	OLFML3	Q9NRN5	406 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	PANK4	Q9NVE7	773 aa		13.92	□□□□□ -0.18
PSMD7-205	ENST00000568615	CNTNAP2	Q9UHC6	1331 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	PVALEF	A0A1B0GWK0	134 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	GRXCR1	A8MXD5	290 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	ZNF623	O75123	536 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	SKI	P12755	728 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	IDE	P14735	1019 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	AFM	P43652	599 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	RAB27A	P51159	221 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	UBE2H	P62256	183 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	ASIC1	P78348	528 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	CUL4B	Q13620	913 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	UBXN11	Q5T124	520 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	NT5DC1	Q5TFE4	455 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	TWF2	Q6IBS0	349 aa	Known RBP	13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	KANK3	Q6NY19	840 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	HAUS6	Q7Z4H7	955 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	SFR1	Q86XK3	245 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	ECHDC2	Q86YB7	292 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	GRAMD1C	Q8IYS0	662 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	TIGD1	Q96MW7	591 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	GBP4	Q96PP9	640 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	RAD9A	Q99638	391 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	TMEM161A	Q9NX61	479 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	EYS	Q5T1H1	3165 aa		13.91	□□□□□ -0.18
PSMD7-205	ENST00000568615	SCN5A	Q14524	2016 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	TTLL13P	A6NNM8	815 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	GTPBP6	O43824	516 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	PRPF40A	O75400	957 aa	Known RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	EOMES	O95936	686 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	EDN1	P05305	212 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	STAG3L1	P0CL83	205 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	LIG1	P18858	919 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	HTRA4	P83105	476 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	GTF2B	Q00403	316 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	STRN3	Q13033	797 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	COASY	Q13057	564 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	RAB30	Q15771	203 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	UNC13D	Q70J99	1090 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	ZNF720	Q7Z2F6	126 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	ZNF598	Q86UK7	904 aa	Known RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	CCDC34	Q96HJ3	373 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	CPB2	Q96IY4	423 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	STRA6	Q9BX79	667 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	MRPL4	Q9BYD3	311 aa	Known RBP	13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	BLZF1	Q9H2G9	400 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	FAM105A	Q9NUU6	356 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	PCDHB7	Q9Y5E2	793 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	PCDHA11	Q9Y5I1	949 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	TET1	Q8NFU7	2136 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615	SI	P14410	1827 aa		13.9	□□□□□ -0.18
PSMD7-205	ENST00000568615		K7ENM7	598 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	N4BP3	O15049	544 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	TLL1	O43897	1013 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	NR1I2	O75469	434 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	PPP1R37	O75864	691 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	UPP2	O95045	317 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	ATF7	P17544	494 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	CASP1	P29466	404 aa		13.89	□□□□□ -0.19
PSMD7-205	ENST00000568615	NMT1	P30419	496 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms