RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CDCA3Q99618 268 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 TCF25Q9BQ70 676 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 OFD1O75665 1012 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
CMTM3-215ENST00000568477 MUTP22033 750 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 SSTR3P32745 418 aaPredicted RBP16.02■□□□□ 0.16
CMTM3-215ENST00000568477 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
CMTM3-215ENST00000568477 TOB1P50616 345 aaPredicted RBP16.02■□□□□ 0.16
CMTM3-215ENST00000568477 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 PTGDRQ13258 359 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 SMAD4Q13485 552 aaKnown RBP16.02■□□□□ 0.16
CMTM3-215ENST00000568477 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 MAEAQ7L5Y9 396 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 GJD3Q8N144 294 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 C4orf32Q8N8J7 132 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 TMEM169Q96HH4 297 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 NFKBIZQ9BYH8 718 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 RAB34Q9BZG1 259 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 GPRC5CQ9NQ84 441 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 LRWD1Q9UFC0 647 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 PRKAG3Q9UGI9 489 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
CMTM3-215ENST00000568477 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 NT5C1B-RDH14C9J2C7 533 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 H3BQV1 296 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 LAD1O00515 517 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 PER2O15055 1255 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 MBTPS2O43462 519 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
CMTM3-215ENST00000568477 GJB2P29033 226 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 DUSP6Q16828 381 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 TMC7Q7Z402 723 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 MSLNLQ96KJ4 702 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 CLEC1BQ9P126 229 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 BARX2Q9UMQ3 279 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-215ENST00000568477 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
CMTM3-215ENST00000568477 GLP2RO95838 553 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 SRGAP2BP0DMP2 458 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 ITGA4P13612 1032 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 CYP11B2P19099 503 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 PDIA5Q14554 519 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 SMC1AQ14683 1233 aaKnown RBP16■□□□□ 0.15
CMTM3-215ENST00000568477 BMS1Q14692 1282 aaKnown RBP16■□□□□ 0.15
CMTM3-215ENST00000568477 SMAD2Q15796 467 aaKnown RBP16■□□□□ 0.15
CMTM3-215ENST00000568477 AMHR2Q16671 573 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 RILPL1Q5EBL4 403 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
CMTM3-215ENST00000568477 C1QTNF1Q9BXJ1 281 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
CMTM3-215ENST00000568477 CSRNP2Q9H175 543 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 KANSL3Q9P2N6 904 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 SMC3Q9UQE7 1217 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 IPPQ9Y573 584 aa16■□□□□ 0.15
CMTM3-215ENST00000568477 HIDE1A8MVS5 230 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 EYA4O95677 639 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 GALTP07902 379 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 ARF4P18085 180 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 PRPHP41219 470 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 ZP2Q05996 745 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 COASYQ13057 564 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 ADHFE1Q8IWW8 467 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 IGSF22Q8N9C0 903 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 SMRP1Q8NCR6 262 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 SMG8Q8ND04 991 aaKnown RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 IGSF21Q96ID5 467 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 TRIM6Q9C030 488 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 DNAJB4Q9UDY4 337 aa15.99■□□□□ 0.15
CMTM3-215ENST00000568477 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-215ENST00000568477 B4GALT5O43286 388 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 CA8P35219 290 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 SLC11A1P49279 550 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 ECM1Q16610 540 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 KRT79Q5XKE5 535 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 DTHD1Q6ZMT9 781 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 ZNF280BQ86YH2 543 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 VPS52Q8N1B4 723 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 MRPL43Q8N983 215 aaKnown RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 VN1R2Q8NFZ6 395 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 PRIMPOLQ96LW4 560 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms