RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 ZNF280BQ86YH2 543 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 CCDC83Q8IWF9 413 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 BCL7CQ8WUZ0 217 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-210ENST00000568416 CASP10Q92851 521 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 LLPHQ9BRT6 129 aaKnown RBP21.06■□□□□ 0.96
SPSB3-210ENST00000568416 RSAD1Q9HA92 442 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 DNAJB4Q9UDY4 337 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 CNTNAP2Q9UHC6 1331 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 POTEMA6NI47 508 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 TSPAN1O60635 241 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 CLASP2O75122 1294 aaKnown RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 CXCL14O95715 111 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 XRCC6P12956 609 aaKnown RBP eCLIP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 HOXB8P17481 243 aaPredicted RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 NCLP19338 710 aaKnown RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 ARL2P36404 184 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 SLC11A1P49279 550 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 AFF1P51825 1210 aaKnown RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 RNASELQ05823 741 aaKnown RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 CAPSQ13938 189 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 TFDP1Q14186 410 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 SAFBQ15424 915 aaKnown RBP eCLIP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 VPS52Q8N1B4 723 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 SMG8Q8ND04 991 aaKnown RBP21.05■□□□□ 0.96
SPSB3-210ENST00000568416 CNNM3Q8NE01 707 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 URGCPQ8TCY9 931 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 ASAP3Q8TDY4 903 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 FAM122AQ96E09 287 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 HCFC2Q9Y5Z7 792 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 IRAK3Q9Y616 596 aa21.05■□□□□ 0.96
SPSB3-210ENST00000568416 ARID2Q68CP9 1835 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 DDHD2O94830 711 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 ERLIN2O94905 339 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 CTSAP10619 480 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 AXLP30530 894 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 MCM7P33993 719 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 BMS1Q14692 1282 aaKnown RBP21.04■□□□□ 0.96
SPSB3-210ENST00000568416 PIGOQ8TEQ8 1089 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 C8orf76Q96K31 380 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
SPSB3-210ENST00000568416 GLRA2P23416 452 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 MBTD1Q05BQ5 628 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 AMHR2Q16671 573 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 AUTS2Q8WXX7 1259 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 EDAQ92838 391 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 CCDC51Q96ER9 411 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 RPGRIP1Q96KN7 1286 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 CCDC43Q96MW1 224 aaKnown RBP21.03■□□□□ 0.96
SPSB3-210ENST00000568416 KIF2CQ99661 725 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 TMEM175Q9BSA9 504 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 APOL5Q9BWW9 433 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 VN1R3Q9BXE9 311 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 EIF2AQ9BY44 585 aaKnown RBP21.03■□□□□ 0.96
SPSB3-210ENST00000568416 NFKBIZQ9BYH8 718 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 KANSL3Q9P2N6 904 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 IPPQ9Y573 584 aa21.03■□□□□ 0.96
SPSB3-210ENST00000568416 A0A087WWV3 80 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-210ENST00000568416 INO80B-WBP1J3KQ70 363 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 INPPL1O15357 1258 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 CA8P35219 290 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 ORC2Q13416 577 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-210ENST00000568416 GIT2Q14161 759 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 NOTUMQ6P988 496 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 CATSPER3Q86XQ3 398 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 CPB2Q96IY4 423 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 ZSCAN31Q96LW9 406 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-210ENST00000568416 FOXP1Q9H334 677 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-210ENST00000568416 TUFT1Q9NNX1 390 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 UBN1Q9NPG3 1134 aa21.02■□□□□ 0.96
SPSB3-210ENST00000568416 USO1O60763 962 aaKnown RBP21.01■□□□□ 0.95
SPSB3-210ENST00000568416 MED24O75448 989 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 ITGA4P13612 1032 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 HMGN5P82970 282 aaKnown RBP21.01■□□□□ 0.95
SPSB3-210ENST00000568416 TPRNQ4KMQ1 711 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 FBXO18Q8NFZ0 1043 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 POLR3CQ9BUI4 534 aaPredicted RBP21.01■□□□□ 0.95
SPSB3-210ENST00000568416 CSRNP2Q9H175 543 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 POLR3FQ9H1D9 316 aaPredicted RBP21.01■□□□□ 0.95
SPSB3-210ENST00000568416 RNF39Q9H2S5 420 aa21.01■□□□□ 0.95
SPSB3-210ENST00000568416 NRP1O14786 923 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 POMCP01189 267 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 ALDH2P05091 517 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 OR52Z1P0C646 297 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 ARF4P18085 180 aaPredicted RBP21■□□□□ 0.95
SPSB3-210ENST00000568416 NCBP1Q09161 790 aaKnown RBP21■□□□□ 0.95
SPSB3-210ENST00000568416 ZNF174Q15697 407 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 C8orf34Q49A92 452 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 HFE2Q6ZVN8 426 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 SLC22A17Q8WUG5 538 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 FAM193BQ96PV7 902 aaPredicted RBP21■□□□□ 0.95
SPSB3-210ENST00000568416 ADAM7Q9H2U9 754 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 STK39Q9UEW8 545 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 CDH22Q9UJ99 828 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 DBR1Q9UK59 544 aaKnown RBP21■□□□□ 0.95
SPSB3-210ENST00000568416 FAN1Q9Y2M0 1017 aa21■□□□□ 0.95
SPSB3-210ENST00000568416 ZXDAP98168 799 aa20.99■□□□□ 0.95
SPSB3-210ENST00000568416 ITIH3Q06033 890 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms