RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 XKR3Q5GH77 459 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 MOXD1Q6UVY6 613 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 OTUD6AQ7L8S5 288 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 KRT25Q7Z3Z0 450 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 RBM23Q86U06 439 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ADHFE1Q8IWW8 467 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 RNF169Q8NCN4 708 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 SPPL3Q8TCT6 385 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 RASGRP4Q8TDF6 673 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CRYGNQ8WXF5 182 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 SLC5A5Q92911 643 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM20AQ96MK3 541 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CDCA3Q99618 268 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 LRFN3Q9BTN0 628 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 RBCK1Q9BYM8 510 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 TMX1Q9H3N1 280 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ERVK-5Q9HDB9 667 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 TLR9Q9NR96 1032 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CHST12Q9NRB3 414 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 TYW1Q9NV66 732 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM161AQ9NX61 479 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 SEPT9Q9UHD8 586 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 DDX25Q9UHL0 483 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 NID2Q14112 1375 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 COL4A6Q14031 1691 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 PLXNA4Q9HCM2 1894 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CYP3A7-CYP3A51PA0A087WV96 503 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 PRR33A8MZF0 331 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 ZBTB42B2RXF5 422 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 C9IYK1 514 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 MBTPS2O43462 519 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 DCXO43602 365 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 CCNT1O60563 726 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FGF18O76093 207 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FBXO45P0C2W1 286 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 GCFC2P16383 781 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SFPQP23246 707 aaKnown RBP eCLIP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 CYP3A7P24462 503 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 CA8P35219 290 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 NRIP1P48552 1158 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM189BP81408 668 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 PRKCEQ02156 737 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 RNASELQ05823 741 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 HYAL1Q12794 435 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SMAD4Q13485 552 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 TOB2Q14106 344 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 TRIM29Q14134 588 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 NR6A1Q15406 480 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 INF2Q27J81 1249 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 CTC1Q2NKJ3 1217 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 LETM2Q2VYF4 491 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 MTERF2Q49AM1 385 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM102BQ5T8I3 360 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 TMC7Q7Z402 723 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 NEK8Q86SG6 692 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM228AQ86W67 206 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SLFN12Q8IYM2 578 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 CRIPAKQ8N1N5 446 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 LRRC43Q8N309 656 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 LRRC71Q8N4P6 559 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 EFHBQ8N7U6 833 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 COLGALT1Q8NBJ5 622 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 DAGLBQ8NCG7 672 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM40Q8WWA1 233 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 LINC01599Q8WXQ3 324 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SLC7A3Q8WY07 619 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 RSPH1Q8WYR4 309 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 ZNF558Q96NG5 402 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 MRPL9Q9BYD2 267 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 NIFKQ9BYG3 293 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM117Q9H0C3 514 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 ADAMTS10Q9H324 1103 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 UNC45AQ9H3U1 944 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 RC3H2Q9HBD1 1191 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 NGRNQ9NPE2 291 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SPG21Q9NZD8 308 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 KIAA1468Q9P260 1216 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 SUCLA2Q9P2R7 463 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 LZTS1Q9Y250 596 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 FAN1Q9Y2M0 1017 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 ATG2AQ2TAZ0 1938 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 REV3LO60673 3130 aa5.22□□□□□ -1.57
HERPUD1-213ENST00000568358 hCG_2014768A0A024R1R8 64 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 A0A0U1RQF3 1178 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 FAM86C2PA6NEL3 165 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 PER2O15055 1255 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 ADAMTS3O15072 1205 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 TBX3O15119 743 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 ASAP2O43150 1006 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 GAS2O43903 313 aaKnown RBP5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 MGEA5O60502 916 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 PSMD10O75832 226 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 LINC00271P0C7V0 271 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 FGFR1P11362 822 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 DARSP14868 501 aaKnown RBP5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 DNAJB1P25685 340 aa5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 GTF2F1P35269 517 aaKnown RBP eCLIP5.21□□□□□ -1.58
HERPUD1-213ENST00000568358 LTBRP36941 435 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms