RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SLKQ9H2G2 1235 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 DHX33Q9H6R0 707 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 DBR1Q9UK59 544 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 PCDHB2Q9Y5E7 798 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-223ENST00000568301 CCDC194A0A1B0GVG4 234 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 MEIS3P2A8K0S8 358 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 CDKL5O76039 1030 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 RFC5P40937 340 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 NPEPPSP55786 919 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 STK3Q13188 491 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 PLA2G4FQ68DD2 849 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 NEK8Q86SG6 692 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 C4orf19Q8IY42 314 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
COMMD4-223ENST00000568301 CEP170P1Q96L14 293 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.28
COMMD4-223ENST00000568301 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 KCNJ14Q9UNX9 436 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 USTQ9Y2C2 406 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
COMMD4-223ENST00000568301 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 ASAP2O43150 1006 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 GAS2O43903 313 aaKnown RBP16.82■□□□□ 0.28
COMMD4-223ENST00000568301 ALDH2P05091 517 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 XBP1P17861 261 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 SLC11A1P49279 550 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 CLCN5P51795 746 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 EPHA7Q15375 998 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 OTUD6AQ7L8S5 288 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
COMMD4-223ENST00000568301 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 BCL7CQ8WUZ0 217 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-223ENST00000568301 PSPC1Q8WXF1 523 aaKnown RBP16.82■□□□□ 0.28
COMMD4-223ENST00000568301 MFSD1Q9H3U5 465 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 DNAJB4Q9UDY4 337 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 DNAH14Q0VDD8 3507 aa16.82■□□□□ 0.28
COMMD4-223ENST00000568301 ZNF292O60281 2723 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 SRGAP2CP0DJJ0 459 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-223ENST00000568301 FOXK2Q01167 660 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 LAMTOR4Q0VGL1 99 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 PCBP1Q15365 356 aaKnown RBP eCLIP16.81■□□□□ 0.28
COMMD4-223ENST00000568301 CWF19L1Q69YN2 538 aaKnown RBP16.81■□□□□ 0.28
COMMD4-223ENST00000568301 TMC5Q6UXY8 1006 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 ZNF280BQ86YH2 543 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 HAS1Q92839 578 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 TMEM143Q96AN5 459 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 VN1R3Q9BXE9 311 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 RSAD1Q9HA92 442 aa16.81■□□□□ 0.28
COMMD4-223ENST00000568301 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-223ENST00000568301 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 PI15O43692 258 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
COMMD4-223ENST00000568301 DDHD2O94830 711 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 YWHABP31946 246 aaKnown RBP16.8■□□□□ 0.28
COMMD4-223ENST00000568301 SCRN1Q12765 414 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 CABP7Q86V35 215 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 SLFN12Q8IYM2 578 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 FLCNQ8NFG4 579 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 LXNQ9BS40 222 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 ZSWIM4Q9H7M6 989 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 MINDY3Q9H8M7 445 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 UBN1Q9NPG3 1134 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
COMMD4-223ENST00000568301 MARCH6O60337 910 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 B4GALT3O60512 393 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 LILRB3O75022 631 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 NPR3P17342 541 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
COMMD4-223ENST00000568301 UBXN11Q5T124 520 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 PIK3AP1Q6ZUJ8 805 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 GPR149Q86SP6 731 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 FAM193BQ96PV7 902 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-223ENST00000568301 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 RGL1Q9NZL6 768 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 GVINP1Q7Z2Y8 2422 aa16.79■□□□□ 0.28
COMMD4-223ENST00000568301 ARID2Q68CP9 1835 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 PFKFB2O60825 505 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 KLRC2P26717 231 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 AXLP30530 894 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms