RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 SCN9AQ15858 1988 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 DLEC1Q9Y238 1755 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 PRR19A6NJB7 356 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 C19orf81C9J6K1 198 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 FANCGO15287 622 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 TLR3O15455 904 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 POLR2DO15514 142 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 CCNT1O60563 726 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 PPP1R11O60927 126 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 FOSP01100 380 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 TGFB1P01137 390 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 CD97P48960 835 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 SNAP25P60880 206 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 ORC2Q13416 577 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 MPP2Q14168 576 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 MAP7Q14244 749 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 LETM2Q2VYF4 491 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 LONRF3Q496Y0 759 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 KIAA1755Q5JYT7 1200 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 SPECC1Q5M775 1068 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 NEK8Q86SG6 692 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 SCYL3Q8IZE3 742 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 PRPF38AQ8NAV1 312 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 CNNM3Q8NE01 707 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 TBCKQ8TEA7 893 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 LPAR1Q92633 364 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 FEZ1Q99689 392 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 PYM1Q9BRP8 204 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 FUCA2Q9BTY2 467 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 SPON2Q9BUD6 331 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 GGA3Q9NZ52 723 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-218ENST00000568153 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
CAPN3-218ENST00000568153 VWA3AA6NCI4 1184 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 GLTPD2A6NH11 291 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 WDR46O15213 610 aaKnown RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 MARCH6O60337 910 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 ZBED4O75132 1171 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 USP2O75604 605 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 BPNT1O95861 308 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PRPHP41219 470 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 BACE1P56817 501 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 GRIN1Q05586 938 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 SPP2Q13103 211 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PDIA5Q14554 519 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PPP4R3AQ6IN85 833 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PAOXQ6QHF9 649 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 KRBA2Q6ZNG9 492 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 REC114Q7Z4M0 266 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 IQUBQ8NA54 791 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 ZKSCAN4Q969J2 545 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 EPSTI1Q96J88 318 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 EAF1Q96JC9 268 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 WRNIP1Q96S55 665 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 LRRC3Q9BY71 257 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 GLIS2Q9BZE0 524 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 NAT10Q9H0A0 1025 aaKnown RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 FBRSQ9HAH7 460 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 SSU72Q9NP77 194 aaKnown RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 C1GALT1Q9NS00 363 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 ANO10Q9NW15 660 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 PNMA2Q9UL42 364 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 ZHX2Q9Y6X8 837 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 DDX60LQ5H9U9 1706 aaKnown RBP6.92□□□□□ -1.3
CAPN3-218ENST00000568153 NAV1Q8NEY1 1877 aa6.92□□□□□ -1.3
CAPN3-218ENST00000568153 GCOM1H8Y6P7 765 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 MEIS2O14770 477 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 NEMFO60524 1076 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 MED26O95402 600 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 GCFC2P16383 781 aaKnown RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 GRK4P32298 578 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 EPHX2P34913 555 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 NF2P35240 595 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 UBA7P41226 1012 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 ETF1P62495 437 aaKnown RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 IL17AQ16552 155 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 UBE2SQ16763 222 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 USH1GQ495M9 461 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 CCDC174Q6PII3 467 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 USP17L6PQ6QN14 398 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 KRT26Q7Z3Y9 468 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 CEP57L1Q8IYX8 460 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 AK8Q96MA6 479 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 MFSD14AQ96MC6 490 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 SLF1Q9BQI6 1058 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms