RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 CBX2Q14781 532 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 ANKRD54Q6NXT1 300 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 CCDC83Q8IWF9 413 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 CNNM3Q8NE01 707 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 C8orf76Q96K31 380 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 PHF7Q9BWX1 381 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 SH2B1Q9NRF2 756 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-216ENST00000567023 KANSL3Q9P2N6 904 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 CNTNAP2Q9UHC6 1331 aa15.86■□□□□ 0.13
COMMD4-216ENST00000567023 WDFY4Q6ZS81 3184 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 POTEMA6NI47 508 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 ERLIN2O94905 339 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 MCM7P33993 719 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 FOSBP53539 338 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 GIT2Q14161 759 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 TFDP1Q14186 410 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 LONRF3Q496Y0 759 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 SYCE2Q6PIF2 218 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 TMEM173Q86WV6 379 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-216ENST00000567023 CATSPER3Q86XQ3 398 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 RNF135Q8IUD6 432 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 URGCPQ8TCY9 931 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 PIGOQ8TEQ8 1089 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 CCDC51Q96ER9 411 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 ZBP1Q9H171 429 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 RSAD1Q9HA92 442 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 TUFT1Q9NNX1 390 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 UBN1Q9NPG3 1134 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 STK39Q9UEW8 545 aa15.85■□□□□ 0.13
COMMD4-216ENST00000567023 INPPL1O15357 1258 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 TSPAN1O60635 241 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 CXCL14O95715 111 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 CTSAP10619 480 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 TECP42680 631 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 RBM25P49756 843 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 AFF1P51825 1210 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 GUCY1B3Q02153 619 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 RNASELQ05823 741 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 NCBP1Q09161 790 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 CAPSQ13938 189 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 AMHR2Q16671 573 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 C8orf34Q49A92 452 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 ZNF280BQ86YH2 543 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 VPS52Q8N1B4 723 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 SMG8Q8ND04 991 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 CASP10Q92851 521 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 POLR3CQ9BUI4 534 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 DNAJB4Q9UDY4 337 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 DBR1Q9UK59 544 aaKnown RBP15.84■□□□□ 0.13
COMMD4-216ENST00000567023 INPP5FQ9Y2H2 1132 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
COMMD4-216ENST00000567023 CLASP2O75122 1294 aaKnown RBP15.83■□□□□ 0.12
COMMD4-216ENST00000567023 DDHD2O94830 711 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 ALDH2P05091 517 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 GLRA2P23416 452 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 RPA1P27694 616 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 TRAPPC10P48553 1259 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 MBTD1Q05BQ5 628 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 ASAP3Q8TDY4 903 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 TMEM175Q9BSA9 504 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 CSRNP2Q9H175 543 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 MUTYHQ9UIF7 546 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 IPPQ9Y573 584 aa15.83■□□□□ 0.12
COMMD4-216ENST00000567023 INO80B-WBP1J3KQ70 363 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 B4GALT3O60512 393 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 MED24O75448 989 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 ATP2B1P20020 1258 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 MUTP22033 750 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 PLA2G5P39877 138 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 SLC11A1P49279 550 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 NOSTRINQ8IVI9 506 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 MCPH1Q8NEM0 835 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 BCL7CQ8WUZ0 217 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-216ENST00000567023 EDAQ92838 391 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
COMMD4-216ENST00000567023 NACC1Q96RE7 527 aa15.82■□□□□ 0.12
COMMD4-216ENST00000567023 EIF2AQ9BY44 585 aaKnown RBP15.82■□□□□ 0.12
COMMD4-216ENST00000567023 A0A087WWV3 80 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 A0A1B0GUA9 196 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 OR52Z1P0C646 297 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 ITGA4P13612 1032 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 ARF4P18085 180 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-216ENST00000567023 U2AF2P26368 475 aaKnown RBP eCLIP15.81■□□□□ 0.12
COMMD4-216ENST00000567023 ITIH3Q06033 890 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 ZNF174Q15697 407 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 C4orf32Q8N8J7 132 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 FAM193BQ96PV7 902 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-216ENST00000567023 VN1R3Q9BXE9 311 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
COMMD4-216ENST00000567023 POLR3FQ9H1D9 316 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-216ENST00000567023 ADAM7Q9H2U9 754 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms