RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 ADGRA3Q8IWK6 1321 aa15.12■□□□□ 0.01
SPG7-215ENST00000566682 NLRC5Q86WI3 1866 aa15.12■□□□□ 0.01
SPG7-215ENST00000566682 LINC01553A4QN01 128 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 CCDC169A6NNP5 214 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 B4GALT5O43286 388 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 ARF4P18085 180 aaPredicted RBP15.11■□□□□ 0.01
SPG7-215ENST00000566682 STAT6P42226 847 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 NPTX2P47972 431 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 GATMP50440 423 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 NCBP1Q09161 790 aaKnown RBP15.11■□□□□ 0.01
SPG7-215ENST00000566682 DMP1Q13316 513 aaPredicted RBP15.11■□□□□ 0.01
SPG7-215ENST00000566682 GIT2Q14161 759 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 FAM187BQ17R55 369 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 SV2BQ7L1I2 683 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 SPRED2Q7Z698 418 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 REEP2Q9BRK0 252 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 NTPCRQ9BSD7 190 aaKnown RBP15.11■□□□□ 0.01
SPG7-215ENST00000566682 KIFC3Q9BVG8 833 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 CERS4Q9HA82 394 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 FAM105AQ9NUU6 356 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 PRMT7Q9NVM4 692 aaPredicted RBP15.11■□□□□ 0.01
SPG7-215ENST00000566682 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 COL4A6Q14031 1691 aa15.11■□□□□ 0.01
SPG7-215ENST00000566682 EOMESO95936 686 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 KRT18P05783 430 aaKnown RBP15.1■□□□□ 0.01
SPG7-215ENST00000566682 FGFR1P11362 822 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 PLS3P13797 630 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
SPG7-215ENST00000566682 LIG1P18858 919 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 EFNA5P52803 228 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 BTG3Q14201 252 aaPredicted RBP15.1■□□□□ 0.01
SPG7-215ENST00000566682 MAPK6Q16659 721 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 UBXN11Q5T124 520 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 RESP18Q5W5W9 173 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 NOTUMQ6P988 496 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
SPG7-215ENST00000566682 FIBCD1Q8N539 461 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 RNF169Q8NCN4 708 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
SPG7-215ENST00000566682 CCDC113Q9H0I3 377 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
SPG7-215ENST00000566682 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 K7ERI5 159 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 ACKR2O00590 384 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 ZNF623O75123 536 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 PRKCBP05771 671 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 SKIP12755 728 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 RAB27AP51159 221 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 E2F4Q16254 413 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 ADALQ6DHV7 355 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 DYMQ7RTS9 669 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 SPIRE2Q8WWL2 714 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 TGS1Q96RS0 853 aaKnown RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 PRDM12Q9H4Q4 367 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 TMEM134Q9H6X4 195 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 RNF19AQ9NV58 838 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 ARHGAP28Q9P2N2 729 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 KCNG1Q9UIX4 513 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
SPG7-215ENST00000566682 PCDHB2Q9Y5E7 798 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 RALGAPA2Q2PPJ7 1873 aa15.09■□□□□ 0.01
SPG7-215ENST00000566682 KIAA1671Q9BY89 1806 aa15.08■□□□□ 0.01
SPG7-215ENST00000566682 MYMKA6NI61 221 aa15.08■□□□□ 0
SPG7-215ENST00000566682 TBKBP1A7MCY6 615 aa15.08■□□□□ 0
SPG7-215ENST00000566682 SLC16A4O15374 487 aa15.08■□□□□ 0
SPG7-215ENST00000566682 POLR2DO15514 142 aaKnown RBP15.08■□□□□ 0
SPG7-215ENST00000566682 HOXA2O43364 376 aa15.08■□□□□ 0
SPG7-215ENST00000566682 FAM13AO94988 1023 aa15.08■□□□□ 0
SPG7-215ENST00000566682 EDN1P05305 212 aa15.08■□□□□ 0
SPG7-215ENST00000566682 ZNF131P52739 623 aa15.08■□□□□ 0
SPG7-215ENST00000566682 SMTNP53814 917 aa15.08■□□□□ 0
SPG7-215ENST00000566682 ERVK-21P61565 698 aa15.08■□□□□ 0
SPG7-215ENST00000566682 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
SPG7-215ENST00000566682 LONRF3Q496Y0 759 aa15.08■□□□□ 0
SPG7-215ENST00000566682 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
SPG7-215ENST00000566682 MYCT1Q8N699 235 aa15.08■□□□□ 0
SPG7-215ENST00000566682 IQUBQ8NA54 791 aa15.08■□□□□ 0
SPG7-215ENST00000566682 ARNTL2Q8WYA1 636 aa15.08■□□□□ 0
SPG7-215ENST00000566682 DDX12PQ92771 950 aa15.08■□□□□ 0
SPG7-215ENST00000566682 LPPQ93052 612 aa15.08■□□□□ 0
SPG7-215ENST00000566682 DHX58Q96C10 678 aa15.08■□□□□ 0
SPG7-215ENST00000566682 CCDC51Q96ER9 411 aa15.08■□□□□ 0
SPG7-215ENST00000566682 C17orf80Q9BSJ5 609 aa15.08■□□□□ 0
SPG7-215ENST00000566682 EIF2AQ9BY44 585 aaKnown RBP15.08■□□□□ 0
SPG7-215ENST00000566682 ZHX3Q9H4I2 956 aa15.08■□□□□ 0
SPG7-215ENST00000566682 PARVGQ9HBI0 331 aa15.08■□□□□ 0
SPG7-215ENST00000566682 MTUS1Q9ULD2 1270 aa15.08■□□□□ 0
SPG7-215ENST00000566682 CIZ1Q9ULV3 898 aaPredicted RBP15.08■□□□□ 0
SPG7-215ENST00000566682 CNTNAP2Q9UHC6 1331 aa15.08■□□□□ 0
SPG7-215ENST00000566682 MEIS3P2A8K0S8 358 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms