RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 RNF149Q8NC42 400 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 RIPOR3Q96MK2 946 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 FAM193BQ96PV7 902 aaPredicted RBP30.85■■■□□ 2.53
UBFD1-206ENST00000566669 TMEM175Q9BSA9 504 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 RSAD1Q9HA92 442 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 INPP5FQ9Y2H2 1132 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 NT5C1B-RDH14C9J2C7 533 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 CLASP2O75122 1294 aaKnown RBP30.84■■■□□ 2.53
UBFD1-206ENST00000566669 DGAT1O75907 488 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 SLITRK3O94933 977 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 CA8P35219 290 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 ME3Q16798 604 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 ZNF579Q8NAF0 562 aaKnown RBP30.84■■■□□ 2.53
UBFD1-206ENST00000566669 CCDC43Q96MW1 224 aaKnown RBP30.84■■■□□ 2.53
UBFD1-206ENST00000566669 HSD17B14Q9BPX1 270 aa30.84■■■□□ 2.53
UBFD1-206ENST00000566669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.83■■■□□ 2.53
UBFD1-206ENST00000566669 TMEM221A6NGB7 291 aa30.83■■■□□ 2.53
UBFD1-206ENST00000566669 M0R296 226 aa30.83■■■□□ 2.53
UBFD1-206ENST00000566669 NEMFO60524 1076 aa30.83■■■□□ 2.53
UBFD1-206ENST00000566669 NCLP19338 710 aaKnown RBP30.83■■■□□ 2.53
UBFD1-206ENST00000566669 HOXA11P31270 313 aaPredicted RBP30.83■■■□□ 2.53
UBFD1-206ENST00000566669 CYP4A11Q02928 519 aa30.83■■■□□ 2.53
UBFD1-206ENST00000566669 IFNLR1Q8IU57 520 aaPredicted RBP30.83■■■□□ 2.53
UBFD1-206ENST00000566669 EIF2AK1Q9BQI3 630 aaKnown RBP30.83■■■□□ 2.53
UBFD1-206ENST00000566669 ALDH2P05091 517 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 XRCC6P12956 609 aaKnown RBP eCLIP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 SIGLEC14Q08ET2 396 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 CTTNQ14247 550 aaKnown RBP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 EARS2Q5JPH6 523 aaKnown RBP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 NOTUMQ6P988 496 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 AGMOQ6ZNB7 445 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 HACE1Q8IYU2 909 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 NSUN7Q8NE18 718 aaKnown RBP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 NFKBIZQ9BYH8 718 aa30.82■■■□□ 2.52
UBFD1-206ENST00000566669 TTC12Q9H892 705 aaPredicted RBP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 DAXXQ9UER7 740 aaPredicted RBP30.82■■■□□ 2.52
UBFD1-206ENST00000566669 NEK4P51957 841 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 PTENP60484 403 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 PTPN21Q16825 1174 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 SUGP1Q8IWZ8 645 aaKnown RBP30.81■■■□□ 2.52
UBFD1-206ENST00000566669 DIS3L2Q8IYB7 885 aaKnown RBP30.81■■■□□ 2.52
UBFD1-206ENST00000566669 NECAB1Q8N987 351 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 PBXIP1Q96AQ6 731 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 EMILIN2Q9BXX0 1053 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 MINDY3Q9H8M7 445 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 SSX2IPQ9Y2D8 614 aa30.81■■■□□ 2.52
UBFD1-206ENST00000566669 SAFBQ15424 915 aaKnown RBP eCLIP30.8■■■□□ 2.52
UBFD1-206ENST00000566669 ITGA4P13612 1032 aa30.79■■■□□ 2.52
UBFD1-206ENST00000566669 SLC11A1P49279 550 aa30.79■■■□□ 2.52
UBFD1-206ENST00000566669 LONRF3Q496Y0 759 aa30.79■■■□□ 2.52
UBFD1-206ENST00000566669 GBP3Q9H0R5 595 aa30.79■■■□□ 2.52
UBFD1-206ENST00000566669 FAN1Q9Y2M0 1017 aa30.79■■■□□ 2.52
UBFD1-206ENST00000566669 TECTAO75443 2155 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 MEIS3P2A8K0S8 358 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 BTBD18B2RXH4 712 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 INPPL1O15357 1258 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 NR1I2O75469 434 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 ORC2Q13416 577 aaPredicted RBP30.78■■■□□ 2.52
UBFD1-206ENST00000566669 ATAT1Q5SQI0 421 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 UBXN11Q5T124 520 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 TMEM173Q86WV6 379 aaPredicted RBP30.78■■■□□ 2.52
UBFD1-206ENST00000566669 FBXL18Q96ME1 805 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 DNAJB4Q9UDY4 337 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 DPP7Q9UHL4 492 aa30.78■■■□□ 2.52
UBFD1-206ENST00000566669 FAM205CA6NFA0 338 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 KIAA1841Q6NSI8 718 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 ELMSAN1Q6PJG2 1045 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 ZBTB33Q86T24 672 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 UBALD2Q8IYN6 164 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 MTMR9Q96QG7 549 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 APOL5Q9BWW9 433 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 XPNPEP1Q9NQW7 623 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 BMP2KQ9NSY1 1161 aaPredicted RBP30.77■■■□□ 2.52
UBFD1-206ENST00000566669 USTQ9Y2C2 406 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 ZMYM2Q9UBW7 1377 aa30.77■■■□□ 2.52
UBFD1-206ENST00000566669 INO80B-WBP1J3KQ70 363 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 TSPAN1O60635 241 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 TXKP42681 527 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 PTPN14Q15678 1187 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 CABP7Q86V35 215 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 ZNF280BQ86YH2 543 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 PLCD3Q8N3E9 789 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 FBXL6Q8N531 539 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 TRIM6Q9C030 488 aaPredicted RBP30.76■■■□□ 2.51
UBFD1-206ENST00000566669 CSRNP2Q9H175 543 aa30.76■■■□□ 2.51
UBFD1-206ENST00000566669 MRPL17Q9NRX2 175 aaKnown RBP30.76■■■□□ 2.51
UBFD1-206ENST00000566669 ZNF318Q5VUA4 2279 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 ARL2P36404 184 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 RARRES1P49788 294 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 SLC22A17Q8WUG5 538 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 SFXN1Q9H9B4 322 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 TUFT1Q9NNX1 390 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 GIT1Q9Y2X7 761 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 IPPQ9Y573 584 aa30.75■■■□□ 2.51
UBFD1-206ENST00000566669 ZBTB39O15060 712 aa30.74■■■□□ 2.51
UBFD1-206ENST00000566669 LARGE1O95461 756 aa30.74■■■□□ 2.51
UBFD1-206ENST00000566669 NHLH1Q02575 133 aa30.74■■■□□ 2.51
UBFD1-206ENST00000566669 SMG8Q8ND04 991 aaKnown RBP30.74■■■□□ 2.51
UBFD1-206ENST00000566669 MCPH1Q8NEM0 835 aa30.74■■■□□ 2.51
UBFD1-206ENST00000566669 LLPHQ9BRT6 129 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms