RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PAK2Q13177 524 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 PNOCQ13519 176 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 LPIN1Q14693 890 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 FAM178BQ8IXR5 827 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 USP38Q8NB14 1042 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 BADQ92934 168 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
KARS-207ENST00000566560 NFKBIZQ9BYH8 718 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 INO80BQ9C086 356 aaPredicted RBP12.65□□□□□ -0.38
KARS-207ENST00000566560 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 C2orf40Q9H1Z8 148 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 IFT122Q9HBG6 1241 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
KARS-207ENST00000566560 H0YCG3 227 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 SLC16A4O15374 487 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 TRAK2O60296 914 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 ERLIN2O94905 339 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 RPN1P04843 607 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 CD52P31358 61 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 NCKAP1LP55160 1127 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 POU5F1BQ06416 359 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.39
KARS-207ENST00000566560 HERC4Q5GLZ8 1057 aaPredicted RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 FAM26FQ5R3K3 315 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 FAM228AQ86W67 206 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 SLC17A8Q8NDX2 589 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 CLSTN2Q9H4D0 955 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 MINDY3Q9H8M7 445 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 OLFML3Q9NRN5 406 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 ARHGAP28Q9P2N2 729 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 KCNG1Q9UIX4 513 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
KARS-207ENST00000566560 SQORQ9Y6N5 450 aa12.64□□□□□ -0.39
KARS-207ENST00000566560 PVALEFA0A1B0GWK0 134 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 DENND3A2RUS2 1198 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 RBAK-RBAKDNI3L0D1 243 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 KLRC4O43908 158 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 CSDE1O75534 798 aaKnown RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 SMC2O95347 1197 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 GCNT3O95395 438 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 CXCL10P02778 98 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 PRKCBP05771 671 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 PFKMP08237 780 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 FGFR4P22455 802 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 NMT1P30419 496 aaKnown RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 EFNA5P52803 228 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 CAMK4Q16566 473 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 MAPK6Q16659 721 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 KMT5BQ4FZB7 885 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 SEPT8Q92599 483 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 CCDC113Q9H0I3 377 aa12.63□□□□□ -0.39
KARS-207ENST00000566560 AGO3Q9H9G7 860 aaKnown RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 PRMT7Q9NVM4 692 aaPredicted RBP12.63□□□□□ -0.39
KARS-207ENST00000566560 CNTNAP2Q9UHC6 1331 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 GPR182O15218 404 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 EHHADHQ08426 723 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 STRN3Q13033 797 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 ALCAMQ13740 583 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 GPNMBQ14956 572 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.39
KARS-207ENST00000566560 PLEKHG4Q58EX7 1191 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 APBB2Q92870 758 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 ERVK-5Q9HDB9 667 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 RMND1Q9NWS8 449 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 ST3GAL5Q9UNP4 418 aa12.62□□□□□ -0.39
KARS-207ENST00000566560 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
KARS-207ENST00000566560 H0YGN5 161 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 K7ERI5 159 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 B4GALT5O43286 388 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms