RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CLIC2O15247 247 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 NPM3O75607 178 aaKnown RBP23.28■■□□□ 1.32
SPSB3-208ENST00000566339 MYL7Q01449 175 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 CETN1Q12798 172 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 SP8Q8IXZ3 490 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 ZSWIM1Q9BR11 485 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 MRIQ9BWK5 157 aa23.28■■□□□ 1.32
SPSB3-208ENST00000566339 ZNF646O15015 1829 aaPredicted RBP23.28■■□□□ 1.32
SPSB3-208ENST00000566339 A0A1B0GUA9 196 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 RSPH10B2B2RC85 870 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 RSPH10BP0C881 870 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 MAPTP10636 758 aaKnown RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 ELF1P32519 619 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 PDE6CP51160 858 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 GPC5P78333 572 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 PPP2R5CQ13362 524 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 PRPF4BQ13523 1007 aaKnown RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 CTTNQ14247 550 aaKnown RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 ZNF720Q7Z2F6 126 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 HOMER3Q9NSC5 361 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 NR2E1Q9Y466 385 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 RPTORQ8N122 1335 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 FAM86B1E9PN63 330 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 POLRMTO00411 1230 aaKnown RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 MPHOSPH10O00566 681 aaKnown RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 MAPK13O15264 365 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 FAM86B2P0C5J1 330 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 GZMAP12544 262 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 PLTPP55058 493 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 MCCD1P59942 119 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-208ENST00000566339 GTF2IP78347 998 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 C12orf56Q8IXR9 622 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 MYCT1Q8N699 235 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 NLGN2Q8NFZ4 835 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 FBXO25Q8TCJ0 367 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 ART4Q93070 314 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 ARHGEF26Q96DR7 871 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 THAP2Q9H0W7 228 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 AGPAT3Q9NRZ7 376 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 DONSONQ9NYP3 566 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 PCDHA3Q9Y5H8 950 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 IGSF9BQ9UPX0 1349 aa23.27■■□□□ 1.32
SPSB3-208ENST00000566339 RTN2O75298 545 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 SNRPFP62306 86 aaKnown RBP23.26■■□□□ 1.31
SPSB3-208ENST00000566339 ELF3P78545 371 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-208ENST00000566339 PRELID2Q8N945 189 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 GPATCH11Q8N954 259 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 GOPCQ9HD26 462 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 ERVK-5Q9HDB9 667 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 SNX24Q9Y343 169 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 LOXHD1Q8IVV2 1947 aa23.26■■□□□ 1.31
SPSB3-208ENST00000566339 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 SHBGP04278 402 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 BFSP1Q12934 665 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 SLC29A2Q14542 456 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 SYDE1Q6ZW31 735 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-208ENST00000566339 FAM228AQ86W67 206 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 CERS5Q8N5B7 392 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 CCDC63Q8NA47 563 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 ALG3Q92685 438 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 NACC1Q96RE7 527 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 FIZ1Q96SL8 496 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 SELENOSQ9BQE4 189 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 STRA6Q9BX79 667 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 MOV10L1Q9BXT6 1211 aaKnown RBP23.25■■□□□ 1.31
SPSB3-208ENST00000566339 TRIM31Q9BZY9 425 aa23.25■■□□□ 1.31
SPSB3-208ENST00000566339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.25■■□□□ 1.31
SPSB3-208ENST00000566339 LOC102724159A0A0B4J2E5 919 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PPEF1O14829 653 aaPredicted RBP23.24■■□□□ 1.31
SPSB3-208ENST00000566339 RIPK2O43353 540 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 EEF2P13639 858 aaKnown RBP23.24■■□□□ 1.31
SPSB3-208ENST00000566339 ABCB4P21439 1286 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PWP2Q15269 919 aaKnown RBP23.24■■□□□ 1.31
SPSB3-208ENST00000566339 SPRED3Q2MJR0 410 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 CDC42EP5Q6NZY7 148 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 INTS8Q75QN2 995 aaKnown RBP23.24■■□□□ 1.31
SPSB3-208ENST00000566339 TRPM8Q7Z2W7 1104 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 MDM1Q8TC05 714 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 SERPINB12Q96P63 405 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PLVAPQ9BX97 442 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 AZI2Q9H6S1 392 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 VEZTQ9HBM0 779 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 C6orf229H3BNL8 230 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 RASGRF2O14827 1237 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 KRT13P13646 458 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 MAN1A1P33908 653 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PEX5P50542 639 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PTPROQ16827 1216 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 ZNF568Q3ZCX4 644 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 SYDE2Q5VT97 1194 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 TMEM179Q6ZVK1 233 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 DNAAF5Q86Y56 855 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 FAM178BQ8IXR5 827 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 PROCA1Q8NCQ7 364 aaPredicted RBP23.24■■□□□ 1.31
SPSB3-208ENST00000566339 LMO3Q8TAP4 145 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 MAIP1Q8WWC4 291 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 TEKT1Q969V4 418 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 WHRNQ9P202 907 aa23.24■■□□□ 1.31
SPSB3-208ENST00000566339 COG5Q9UP83 839 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms