RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 OATP04181 439 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ADH1AP07327 375 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ACTR2P61160 394 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 GPC5P78333 572 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 WTAPQ15007 396 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 LPAL2Q16609 132 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 TSSK4Q6SA08 328 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 RSPO2Q6UXX9 243 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 PRR23CQ6ZRP0 262 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 GET4Q7L5D6 327 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 CELF5Q8N6W0 485 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 KRI1Q8N9T8 703 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 KRT23Q9C075 422 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-215ENST00000565559 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
CAPN3-215ENST00000565559 BACH1O14867 736 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 ZMYND10O75800 440 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 GLUD1P00367 558 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 PFKPQ01813 784 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 CSRP2Q16527 193 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 FAM160B1Q5W0V3 765 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 METTL3Q86U44 580 aaKnown RBP12.64□□□□□ -0.39
CAPN3-215ENST00000565559 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-215ENST00000565559 METTL13Q8N6R0 699 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 NELL2Q99435 816 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 CNNM2Q9H8M5 875 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 LTB4R2Q9NPC1 389 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 JADE2Q9NQC1 790 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 PRMT8Q9NR22 394 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-215ENST00000565559 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 MTF2Q9Y483 593 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-215ENST00000565559 UBIAD1Q9Y5Z9 338 aa12.64□□□□□ -0.39
CAPN3-215ENST00000565559 GPR32O75388 356 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 VTNP04004 478 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 GALTP07902 379 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 GRM4Q14833 912 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 GLB1LQ6UWU2 654 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 UNQ6494/PRO21346Q6UXR6 183 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
CAPN3-215ENST00000565559 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
CAPN3-215ENST00000565559 CNOT1A5YKK6 2376 aaKnown RBP12.63□□□□□ -0.39
CAPN3-215ENST00000565559 SPDYE3A6NKU9 549 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 MEIS2O14770 477 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 RNF40O75150 1001 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 URODP06132 367 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 EIF4BP23588 611 aaKnown RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 AK2P54819 239 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 MTSS1LQ765P7 747 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 BCL7CQ8WUZ0 217 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 PIBF1Q8WXW3 757 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 SCLT1Q96NL6 688 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 KCNH7Q9NS40 1196 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 TBC1D13Q9NVG8 400 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 AKT3Q9Y243 479 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
CAPN3-215ENST00000565559 NFASCO94856 1347 aa12.62□□□□□ -0.39
CAPN3-215ENST00000565559 C2CD2LO14523 706 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 CYTH3O43739 400 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 GDF9O60383 454 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 RFPL2O75678 378 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 C22orf31O95567 290 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 SKIP12755 728 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 TMOD1P28289 359 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 NLRP11P59045 1033 aaKnown RBP12.61□□□□□ -0.39
CAPN3-215ENST00000565559 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
CAPN3-215ENST00000565559 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 PDXDC2PQ6P474 469 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 ST13P5Q8NFI4 369 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-215ENST00000565559 HDAC7Q8WUI4 952 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
CAPN3-215ENST00000565559 VN1R3Q9BXE9 311 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 INPP5FQ9Y2H2 1132 aa12.61□□□□□ -0.39
CAPN3-215ENST00000565559 MIA3Q5JRA6 1907 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 C1QTNF9BB2RNN3 333 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms