RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CAPSQ13938 189 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 SMG8Q8ND04 991 aaKnown RBP26.47■■□□□ 1.83
RAB40C-209ENST00000565511 PIGOQ8TEQ8 1089 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 TCP11Q8WWU5 503 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 FAM122AQ96E09 287 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 IGSF21Q96ID5 467 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 RPGRIP1Q96KN7 1286 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 EIF2AQ9BY44 585 aaKnown RBP26.47■■□□□ 1.83
RAB40C-209ENST00000565511 GAS2O43903 313 aaKnown RBP26.46■■□□□ 1.83
RAB40C-209ENST00000565511 TSPAN1O60635 241 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 ATP2B1P20020 1258 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 AMHR2Q16671 573 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 HFE2Q6ZVN8 426 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 VPS52Q8N1B4 723 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 TMEM169Q96HH4 297 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 CPB2Q96IY4 423 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 KIF2CQ99661 725 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 RNF39Q9H2S5 420 aa26.46■■□□□ 1.83
RAB40C-209ENST00000565511 SPATA31C1P0DKV0 1188 aa26.45■■□□□ 1.82
RAB40C-209ENST00000565511 RARRES1P49788 294 aa26.45■■□□□ 1.82
RAB40C-209ENST00000565511 PTENP60484 403 aa26.45■■□□□ 1.82
RAB40C-209ENST00000565511 EXOC8Q8IYI6 725 aa26.45■■□□□ 1.82
RAB40C-209ENST00000565511 RSAD1Q9HA92 442 aa26.45■■□□□ 1.82
RAB40C-209ENST00000565511 FSD2A1L4K1 749 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 CXCL14O95715 111 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 GLRA2P23416 452 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 SP100P23497 879 aaPredicted RBP26.44■■□□□ 1.82
RAB40C-209ENST00000565511 MCM7P33993 719 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 CA8P35219 290 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 ARL2P36404 184 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 RNASELQ05823 741 aaKnown RBP26.44■■□□□ 1.82
RAB40C-209ENST00000565511 MBTD1Q05BQ5 628 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 TRIM29Q14134 588 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 KANK3Q6NY19 840 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 DDX53Q86TM3 631 aaKnown RBP26.44■■□□□ 1.82
RAB40C-209ENST00000565511 ANKEF1Q9NU02 776 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 LIMCH1Q9UPQ0 1083 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 HES2Q9Y543 173 aa26.44■■□□□ 1.82
RAB40C-209ENST00000565511 TDRD15B5MCY1 1934 aaKnown RBP26.43■■□□□ 1.82
RAB40C-209ENST00000565511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.43■■□□□ 1.82
RAB40C-209ENST00000565511 ASAP2O43150 1006 aa26.43■■□□□ 1.82
RAB40C-209ENST00000565511 MED24O75448 989 aa26.43■■□□□ 1.82
RAB40C-209ENST00000565511 IFNLR1Q8IU57 520 aaPredicted RBP26.43■■□□□ 1.82
RAB40C-209ENST00000565511 PGBD4Q96DM1 585 aa26.43■■□□□ 1.82
RAB40C-209ENST00000565511 GPRC5CQ9NQ84 441 aa26.43■■□□□ 1.82
RAB40C-209ENST00000565511 IPPQ9Y573 584 aa26.43■■□□□ 1.82
RAB40C-209ENST00000565511 B4GALT5O43286 388 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 USO1O60763 962 aaKnown RBP26.42■■□□□ 1.82
RAB40C-209ENST00000565511 POMCP01189 267 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 WEE2P0C1S8 567 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 CTSAP10619 480 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 EPCAMP16422 314 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 NCLP19338 710 aaKnown RBP26.42■■□□□ 1.82
RAB40C-209ENST00000565511 C12orf76Q8N812 135 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-209ENST00000565511 CASP10Q92851 521 aa26.42■■□□□ 1.82
RAB40C-209ENST00000565511 POLR3FQ9H1D9 316 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-209ENST00000565511 ARIH1Q9Y4X5 557 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-209ENST00000565511 DENND4AQ7Z401 1863 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 DGAT1O75907 488 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 ERLIN2O94905 339 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 SRGAP2BP0DMP2 458 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 PTPN14Q15678 1187 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 CDR2LQ86X02 465 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-209ENST00000565511 RSPH1Q8WYR4 309 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 EDAQ92838 391 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 MARCH5Q9NX47 278 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 MIOSQ9NXC5 875 aa26.41■■□□□ 1.82
RAB40C-209ENST00000565511 CNTNAP2Q9UHC6 1331 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 PLXNA3P51805 1871 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 F8W810 466 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 INO80B-WBP1J3KQ70 363 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 ARF4P18085 180 aaPredicted RBP26.4■■□□□ 1.82
RAB40C-209ENST00000565511 MXD4Q14582 209 aaPredicted RBP26.4■■□□□ 1.82
RAB40C-209ENST00000565511 ZNF174Q15697 407 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 C8orf34Q49A92 452 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 MAEAQ7L5Y9 396 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 CATSPER3Q86XQ3 398 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 URGCPQ8TCY9 931 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 SLC22A17Q8WUG5 538 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 C8orf76Q96K31 380 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 POMKQ9H5K3 350 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 IRAK3Q9Y616 596 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 ZDBF2Q9HCK1 2354 aa26.4■■□□□ 1.82
RAB40C-209ENST00000565511 C2orf16Q68DN1 1984 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 HOXB8P17481 243 aaPredicted RBP26.39■■□□□ 1.82
RAB40C-209ENST00000565511 ZXDAP98168 799 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 NBR1Q14596 966 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 POTEGQ6S5H5 508 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 ZFP42Q96MM3 310 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 GAD1Q99259 594 aa26.39■■□□□ 1.82
RAB40C-209ENST00000565511 NXF3Q9H4D5 531 aaKnown RBP26.39■■□□□ 1.82
RAB40C-209ENST00000565511 MYO10Q9HD67 2058 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 NRP1O14786 923 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 INPPL1O15357 1258 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 SSBP05455 408 aaKnown RBP eCLIP26.38■■□□□ 1.81
RAB40C-209ENST00000565511 ITGA4P13612 1032 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 MLH1P40692 756 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 RARS2Q5T160 578 aaKnown RBP26.38■■□□□ 1.81
RAB40C-209ENST00000565511 BSNDQ8WZ55 320 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 APOL6Q9BWW8 343 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms