RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
SPG7-211ENST00000565370 KCNA5P22460 613 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
SPG7-211ENST00000565370 ZRSR1Q15695 479 aaKnown RBP13.6□□□□□ -0.23
SPG7-211ENST00000565370 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 SPPL3Q8TCT6 385 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 ADAMTS19Q8TE59 1207 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 LPPQ93052 612 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 PABPC5Q96DU9 382 aaKnown RBP13.6□□□□□ -0.23
SPG7-211ENST00000565370 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 UHRF1Q96T88 793 aaPredicted RBP13.6□□□□□ -0.23
SPG7-211ENST00000565370 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 ENTPD7Q9NQZ7 604 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 BRWD1Q9NSI6 2320 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 FAM50BQ9Y247 325 aa13.6□□□□□ -0.23
SPG7-211ENST00000565370 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 A0A087WWV3 80 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 PP2D1A8MPX8 630 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 SRGAP2BP0DMP2 458 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 ITGA4P13612 1032 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 PLA2G5P39877 138 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 EFNA5P52803 228 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 PLCB3Q01970 1234 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 BMS1Q14692 1282 aaKnown RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 ECM1Q16610 540 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 MAPK6Q16659 721 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 PUS10Q3MIT2 529 aaKnown RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 APBB1IPQ7Z5R6 666 aaPredicted RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 TMEM169Q96HH4 297 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 TIPINQ9BVW5 301 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 CLDND1Q9NY35 253 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
SPG7-211ENST00000565370 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
SPG7-211ENST00000565370 NCOR1O75376 2440 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 E9PMD0 336 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 N4BP3O15049 544 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPG7-211ENST00000565370 PRKCBP05771 671 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
SPG7-211ENST00000565370 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
SPG7-211ENST00000565370 NDUFV1P49821 464 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 KCNQ1P51787 676 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 AMHR2Q16671 573 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 HYIQ5T013 277 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
SPG7-211ENST00000565370 CALML4Q96GE6 196 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
SPG7-211ENST00000565370 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
SPG7-211ENST00000565370 TCF25Q9BQ70 676 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 KCND2Q9NZV8 630 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 IPPQ9Y573 584 aa13.58□□□□□ -0.24
SPG7-211ENST00000565370 OFD1O75665 1012 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 LIG1P18858 919 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 SYT1P21579 422 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 DNAJB1P25685 340 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 CDC25AP30304 524 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 PBX3P40426 434 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 UBA7P41226 1012 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 BCAR1P56945 870 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 HYAL1Q12794 435 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 PRPF4BQ13523 1007 aaKnown RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 COL19A1Q14993 1142 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 IL17AQ16552 155 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 CABP7Q86V35 215 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 SNX21Q969T3 373 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 NECAB3Q96P71 396 aaPredicted RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 RPS6KC1Q96S38 1066 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 EIF2AQ9BY44 585 aaKnown RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 C17orf75Q9HAS0 396 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 NGRNQ9NPE2 291 aaKnown RBP13.57□□□□□ -0.24
SPG7-211ENST00000565370 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
SPG7-211ENST00000565370 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.56□□□□□ -0.24
SPG7-211ENST00000565370 B4GALT5O43286 388 aa13.56□□□□□ -0.24
SPG7-211ENST00000565370 HIP1RO75146 1068 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms