RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CCT7Q99832 543 aa5.39□□□□□ -1.55
SMG1-211ENST00000565324 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.39□□□□□ -1.55
SMG1-211ENST00000565324 PCDHB8Q9UN66 801 aa5.39□□□□□ -1.55
SMG1-211ENST00000565324 MTMR6Q9Y217 621 aa5.39□□□□□ -1.55
SMG1-211ENST00000565324 TCHHQ07283 1943 aa5.39□□□□□ -1.55
SMG1-211ENST00000565324 MAGEA13PA6NCF6 341 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 ALBP02768 609 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 DYNLT1P63172 113 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TSPY1Q01534 308 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 GCKRQ14397 625 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 STXBP2Q15833 593 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TTC33Q6PID6 262 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 PPHLN1Q8NEY8 458 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 ZNF483Q8TF39 744 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 OMA1Q96E52 524 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 BBS2Q9BXC9 721 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 NCKAP1LP55160 1127 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CTDSPL2Q05D32 466 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TCIRG1Q13488 830 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 POLA2Q14181 598 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TRPM8Q7Z2W7 1104 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 APOL4Q9BPW4 351 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 KPNA4O00629 521 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 COBLO75128 1261 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PPP1R37O75864 691 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PIK3R1P27986 724 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TBL3Q12788 808 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 DDB1Q16531 1140 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 DDIASQ8IXT1 998 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 KCNV2Q8TDN2 545 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MAGED4Q96JG8 741 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CCT8L2Q96SF2 557 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CDCA7Q9BWT1 371 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 G3BP2Q9UN86 482 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 TNPO2O14787 897 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 PSMD3O43242 534 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 RAPGEF3O95398 923 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TRIM49P0CI25 452 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TRIM49CP0CI26 452 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MARK3P27448 753 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 GRM1Q13255 1194 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 ARMC3Q5W041 872 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 RNF219Q5W0B1 726 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 GPR141Q7Z602 305 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 ASNSD1Q9NWL6 643 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 USE1Q9NZ43 259 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 BFARQ9NZS9 450 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 ADGRF5Q8IZF2 1346 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 RPAP1Q9BWH6 1393 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 PALMO75781 387 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MXI1P50539 228 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CTSWP56202 376 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 UBE3AQ05086 875 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 NSUN2Q08J23 767 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMG1-211ENST00000565324 PKN2Q16513 984 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 FOPNLQ96NB1 174 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TMEM161AQ9NX61 479 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PSMC3IPQ9P2W1 217 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 SMAPO00193 183 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 VHLP40337 213 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PSMC6P62333 389 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 RBBP7Q16576 425 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MFN1Q8IWA4 741 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 ZFRQ96KR1 1074 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 ANAPC7Q9UJX3 599 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 KLHL20Q9Y2M5 609 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 RGS5O15539 181 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PPIP5K2O43314 1243 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PDE5AO76074 875 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 SERPINB9P50453 376 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MMRN1Q13201 1228 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 KRT31Q15323 416 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TMC5Q6UXY8 1006 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CCNYL1Q8N7R7 359 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 TMEM35BQ8NCS4 154 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CCDC87Q9NVE4 849 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 SEPT9Q9UHD8 586 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 CLIC4Q9Y696 253 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 SNAP25P60880 206 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 GPC5P78333 572 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 LBRQ14739 615 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 C16orf62Q7Z3J2 963 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 LRRC39Q96DD0 335 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 SUGCTQ9HAC7 445 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 AIPL1Q9NZN9 384 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 CHMP2BQ9UQN3 213 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 MYOM2P54296 1465 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 PLEKHG3A1L390 1219 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 SEC24DO94855 1032 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 IL12RB1P42701 662 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 AP1S2P56377 157 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 C1DQ13901 141 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 MXD4Q14582 209 aaPredicted RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 HABP4Q5JVS0 413 aaKnown RBP5.38□□□□□ -1.55
SMG1-211ENST00000565324 RESP18Q5W5W9 173 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 KRT27Q7Z3Y8 459 aa5.38□□□□□ -1.55
SMG1-211ENST00000565324 FGD2Q7Z6J4 655 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms