RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 BCL7CQ8WUZ0 217 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 LRFN3Q9BTN0 628 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 GBP3Q9H0R5 595 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 POLR3FQ9H1D9 316 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 RSAD1Q9HA92 442 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 GPRC5CQ9NQ84 441 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 DNAJB4Q9UDY4 337 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 USP15Q9Y4E8 981 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 INO80B-WBP1J3KQ70 363 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 B4GALT5O43286 388 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 GALTP07902 379 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
CMTM3-209ENST00000565003 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
CMTM3-209ENST00000565003 POU5F1BQ06416 359 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 ORC2Q13416 577 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-209ENST00000565003 GNL2Q13823 731 aaKnown RBP11.15□□□□□ -0.62
CMTM3-209ENST00000565003 TFDP1Q14186 410 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 LLGL2Q6P1M3 1020 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 TMC7Q7Z402 723 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 ZNF280BQ86YH2 543 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 SMG8Q8ND04 991 aaKnown RBP11.15□□□□□ -0.62
CMTM3-209ENST00000565003 CPB2Q96IY4 423 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 ZBP1Q9H171 429 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 HES2Q9Y543 173 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 IPPQ9Y573 584 aa11.15□□□□□ -0.62
CMTM3-209ENST00000565003 CNTNAP2Q9UHC6 1331 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 FSD2A1L4K1 749 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 DDHD2O94830 711 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 RPA1P27694 616 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 TRAPPC10P48553 1259 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 SLC11A1P49279 550 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 SMC1AQ14683 1233 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 RABEP1Q15276 862 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 ECM1Q16610 540 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 SYCE2Q6PIF2 218 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 TMEM184AQ6ZMB5 413 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 C4orf32Q8N8J7 132 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 URGCPQ8TCY9 931 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 AUTS2Q8WXX7 1259 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 IGSF21Q96ID5 467 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 POP1Q99575 1024 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 POLR3CQ9BUI4 534 aaPredicted RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 VN1R3Q9BXE9 311 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 NFKBIZQ9BYH8 718 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 S1PR5Q9H228 398 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 DBR1Q9UK59 544 aaKnown RBP11.14□□□□□ -0.63
CMTM3-209ENST00000565003 PCDHB6Q9Y5E3 794 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 C5orf42Q9H799 3197 aa11.14□□□□□ -0.63
CMTM3-209ENST00000565003 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 DCXO43602 365 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 GPR37L1O60883 481 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 POMCP01189 267 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 SRGAP2BP0DMP2 458 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 AXLP30530 894 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 CA8P35219 290 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 MLH1P40692 756 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 DDX53Q86TM3 631 aaKnown RBP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 CDR2LQ86X02 465 aaPredicted RBP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 BSNDQ8WZ55 320 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 SUSD6Q92537 303 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 CSRNP2Q9H175 543 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 NXF3Q9H4D5 531 aaKnown RBP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
CMTM3-209ENST00000565003 NOL7Q9UMY1 257 aaKnown RBP11.13□□□□□ -0.63
CMTM3-209ENST00000565003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-209ENST00000565003 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 LOC730098B7Z3J9 87 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 INPPL1O15357 1258 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 ST18O60284 1047 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 CXCL14O95715 111 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms