RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-205ENST00000564899 NCAPHQ15003 741 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 ZC2HC1CQ53FD0 456 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-205ENST00000564899 MARCH8Q5T0T0 291 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 SPATA1Q5VX52 437 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 MFSD5Q6N075 450 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 DEPTORQ8TB45 409 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
SF3B3-205ENST00000564899 VWCEQ96DN2 955 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 FAM122AQ96E09 287 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 TOX2Q96NM4 488 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 TSG101Q99816 390 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
SF3B3-205ENST00000564899 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 ST6GALNAC4Q9H4F1 302 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 HDAC6Q9UBN7 1215 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 KCNG1Q9UIX4 513 aa12.19□□□□□ -0.46
SF3B3-205ENST00000564899 DENND3A2RUS2 1198 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 LRRIQ4A6NIV6 560 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 H0YCG3 227 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 PPP1R37O75864 691 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 GNAT1P11488 350 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 BMP1P13497 986 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 CYP2C18P33260 490 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 CDK7P50613 346 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 RABGGTBP53611 331 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 PMS1P54277 932 aaKnown RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 GTF2BQ00403 316 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 CAPSQ13938 189 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 TPD52L1Q16890 204 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 KNOP1Q1ED39 458 aaKnown RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 NBPF20Q3BBV1 942 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 CENPPQ6IPU0 288 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 TMEM161BQ8NDZ6 487 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 ACCSQ96QU6 501 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 MED15Q96RN5 788 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 NTPCRQ9BSD7 190 aaKnown RBP12.18□□□□□ -0.46
SF3B3-205ENST00000564899 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 AKT3Q9Y243 479 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 MUC6Q6W4X9 2439 aa12.18□□□□□ -0.46
SF3B3-205ENST00000564899 ADGRA3Q8IWK6 1321 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-205ENST00000564899 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ASAP2O43150 1006 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 CYP2C9P11712 490 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 SCP2P22307 547 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 HOXC8P31273 242 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ABCD1P33897 745 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ADAM17P78536 824 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 KCNA1Q09470 495 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 TFDP1Q14186 410 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 HIC1Q14526 733 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 FAM47CQ5HY64 1035 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ANKRD40Q6AI12 368 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ZBTB8OSQ8IWT0 167 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 SYCP3Q8IZU3 236 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 MICALL1Q8N3F8 863 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 VTI1AQ96AJ9 217 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 GLT1D1Q96MS3 346 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 KCTD10Q9H3F6 313 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ARHGAP28Q9P2N2 729 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 GTF2IRD1Q9UHL9 959 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 ZMYM2Q9UBW7 1377 aa12.17□□□□□ -0.46
SF3B3-205ENST00000564899 BRWD1Q9NSI6 2320 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 RFXAPO00287 272 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 PDXKO00764 312 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 TREHO43280 583 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 VTNP04004 478 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 SRGAP2CP0DJJ0 459 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 HOXD13P35453 343 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 ZCWPW2Q504Y3 356 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 FOXR2Q6PJQ5 311 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 RUFY4Q6ZNE9 571 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 HS2ST1Q7LGA3 356 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 MAP4K3Q8IVH8 894 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 KIAA0319LQ8IZA0 1049 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms