RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 STK32BQ9NY57 414 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 LRRC53A6NM62 1247 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 STAM2O75886 525 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ACOT2P49753 483 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ATP2C1P98194 919 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 ARSHQ5FYA8 562 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TCP11X2Q5H9J9 407 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 REM2Q8IYK8 340 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 NSMCE1Q8WV22 266 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 RIT1Q92963 219 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MTIF3Q9H2K0 278 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 FOXP1Q9H334 677 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 RPAP3Q9H6T3 665 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 TRIM45Q9H8W5 580 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 ZMYM5Q9UJ78 669 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 NPR1P16066 1061 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PHBP35232 272 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MAPK9P45984 424 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PEX3P56589 373 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 FAM102BQ5T8I3 360 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TMCO4Q5TGY1 634 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ARHGEF10LQ9HCE6 1279 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 AP1B1Q10567 949 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SCARA5Q6ZMJ2 495 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ZIC5Q96T25 663 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PHACTR1Q9C0D0 580 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PTPN22Q9Y2R2 807 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CAPN6Q9Y6Q1 641 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MICAL3Q7RTP6 2002 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MAP3K13O43283 966 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 FECHP22830 423 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 GUCY2FP51841 1108 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TNNC1P63316 161 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CYP26C1Q6V0L0 522 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 DDX42Q86XP3 938 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-213ENST00000564845 NLGN1Q8N2Q7 840 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-213ENST00000564845 CCDC17Q96LX7 622 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TUBGCP2Q9BSJ2 902 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TUBB6Q9BUF5 446 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PDCL3Q9H2J4 239 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 GOPCQ9HD26 462 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 FANCFQ9NPI8 374 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ZNF263O14978 683 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TTI1O43156 1089 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 STAT2P52630 851 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ZNF543Q08ER8 600 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SLC10A5Q5PT55 438 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 LARP4BQ92615 738 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 USP13Q92995 863 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 TMEM143Q96AN5 459 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 DUSP9Q99956 384 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 TEX12Q9BXU0 123 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ANO3Q9BYT9 981 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MAGEB5Q9BZ81 275 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 KIAA1586Q9HCI6 787 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 OSGEPQ9NPF4 335 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ANKFY1Q9P2R3 1169 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 FRYQ5TBA9 3013 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 LRRIQ3A6PVS8 624 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 M0QZ92 97 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CYP3A7P24462 503 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 HNRNPH1P31943 449 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 SKP1P63208 163 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 NR1H3Q13133 447 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 MTERF2Q49AM1 385 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 OTUD6AQ7L8S5 288 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 FBXO11Q86XK2 927 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 KRT222Q8N1A0 295 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 COG1Q8WTW3 980 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CRYGNQ8WXF5 182 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TSPAN18Q96SJ8 248 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 OSBPL7Q9BZF2 842 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TRIM7Q9C029 511 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 KCND1Q9NSA2 647 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TUBE1Q9UJT0 475 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 O00370 1275 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 NOL3O60936 208 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 SASH3O75995 380 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PYGLP06737 847 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SRGAP2CP0DJJ0 459 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PDE6CP51160 858 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 EIF3BP55884 814 aaKnown RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 RSBN1LQ6PCB5 846 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 LSRQ86X29 649 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 CALML6Q8TD86 181 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 COL11A2P13942 1736 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 PPP6R2O75170 966 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 OR52Z1P0C646 297 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CASQ1P31415 396 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 DNM2P50570 870 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ZNF135P52742 658 aaPredicted RBP3.61□□□□□ -1.83
CHD9-213ENST00000564845 LAMC2Q13753 1193 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 GRM4Q14833 912 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 TSNAXIP1Q2TAA8 658 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 WDR59Q6PJI9 974 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SH3RF1Q7Z6J0 888 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PAF1Q8N7H5 531 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 VPS50Q96JG6 964 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 PNKPQ96T60 521 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms