RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ABCC9O60706 1549 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 ZNF891A8MT65 544 aaPredicted RBP6.21□□□□□ -1.42
CHD9-212ENST00000564641 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.42
CHD9-212ENST00000564641 HOXA3O43365 443 aaPredicted RBP6.21□□□□□ -1.42
CHD9-212ENST00000564641 RAMP2O60895 175 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 CDC45O75419 566 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 PFKMP08237 780 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 LSSP48449 732 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 FRMD7Q6ZUT3 714 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 FAM83AQ86UY5 434 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 ZNF276Q8N554 614 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 GAB3Q8WWW8 586 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 ZNF496Q96IT1 587 aaPredicted RBP6.21□□□□□ -1.42
CHD9-212ENST00000564641 PIF1Q9H611 641 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 NRDE2Q9H7Z3 1164 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 GPRC5BQ9NZH0 403 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 CLCA2Q9UQC9 943 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 NUMBLQ9Y6R0 609 aa6.21□□□□□ -1.42
CHD9-212ENST00000564641 FAM83GA6ND36 823 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 TRIM24O15164 1050 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 TGM5O43548 720 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 SEC24DO94855 1032 aaPredicted RBP6.2□□□□□ -1.42
CHD9-212ENST00000564641 LY86O95711 162 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 CD69Q07108 199 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 IQSEC1Q6DN90 963 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 TAS1R1Q7RTX1 841 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 OR5M3Q8NGP4 307 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 ENKD1Q9H0I2 346 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 EPC1Q9H2F5 836 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 ING3Q9NXR8 418 aa6.2□□□□□ -1.42
CHD9-212ENST00000564641 RAB11FIP3O75154 756 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 RHOBTB3O94955 611 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 TERF2Q15554 542 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 TKFCQ3LXA3 575 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 DOK3Q7L591 496 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 ZNF627Q7L945 461 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 MRGPREQ86SM8 312 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 GLB1L2Q8IW92 636 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 PGBD4Q96DM1 585 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 MFSD3Q96ES6 412 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 IL17RAQ96F46 866 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 CPPED1Q9BRF8 314 aaPredicted RBP6.19□□□□□ -1.42
CHD9-212ENST00000564641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD9-212ENST00000564641 USP18Q9UMW8 372 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 FZD1Q9UP38 647 aa6.19□□□□□ -1.42
CHD9-212ENST00000564641 FOXN1O15353 648 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 DNAJC6O75061 913 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 FAM20BO75063 409 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 ITGB1P05556 798 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 GYPEP15421 78 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 IL2P60568 153 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 MEF2AQ02078 507 aaPredicted RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 DUSP2Q05923 314 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 MRPL49Q13405 166 aaKnown RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 PCBP1Q15365 356 aaKnown RBP eCLIP6.18□□□□□ -1.42
CHD9-212ENST00000564641 TAF7LQ5H9L4 462 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 LY6G5CQ5SRR4 150 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 ZBTB41Q5SVQ8 909 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 LAIR1Q6GTX8 287 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 RHOUQ7L0Q8 258 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 PIK3C3Q8NEB9 887 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 GPR101Q96P66 508 aaPredicted RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 FAM193BQ96PV7 902 aaPredicted RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 TARS2Q9BW92 718 aaKnown RBP6.18□□□□□ -1.42
CHD9-212ENST00000564641 HDAC5Q9UQL6 1122 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 DMRT1Q9Y5R6 373 aa6.18□□□□□ -1.42
CHD9-212ENST00000564641 GRXCR1A8MXD5 290 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 PPFIA2O75334 1257 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 RPS6KA4O75676 772 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 GZMKP49863 264 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 CXorf67Q86X51 503 aaPredicted RBP6.17□□□□□ -1.42
CHD9-212ENST00000564641 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
CHD9-212ENST00000564641 TTPALQ9BTX7 342 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 SPTLC3Q9NUV7 552 aa6.17□□□□□ -1.42
CHD9-212ENST00000564641 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.17□□□□□ -1.42
CHD9-212ENST00000564641 A0A1W2PR48 441 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 PRSS38A1L453 326 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 STC2O76061 302 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 FKBP9O95302 570 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 HK1P19367 917 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 PTPAQ15257 358 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 VPS72Q15906 364 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 DDB1Q16531 1140 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 DALRD3Q5D0E6 543 aaKnown RBP6.16□□□□□ -1.42
CHD9-212ENST00000564641 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 LRRC55Q6ZSA7 311 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 FKBP9P1Q75LS8 142 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 OR52N2Q8NGI0 321 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 OR14C36Q8NHC7 312 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 DCLRE1CQ96SD1 692 aaKnown RBP6.16□□□□□ -1.42
CHD9-212ENST00000564641 FDXACB1Q9BRP7 624 aaPredicted RBP6.16□□□□□ -1.42
CHD9-212ENST00000564641 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 PRSS50Q9UI38 385 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 SORCS3Q9UPU3 1222 aa6.16□□□□□ -1.42
CHD9-212ENST00000564641 KDM1AO60341 852 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms