RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 DRP2Q13474 957 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 MBTPS1Q14703 1052 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 RAB30Q15771 203 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 DPCR1Q3MIW9 517 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 ANO6Q4KMQ2 910 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 COBLL1Q53SF7 1204 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 CNKSR3Q6P9H4 555 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 RPAINQ86UA6 219 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 ZBTB8OSQ8IWT0 167 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 SMYD4Q8IYR2 804 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-208ENST00000564247 GUF1Q8N442 669 aaKnown RBP18.64■□□□□ 0.57
CMTM3-208ENST00000564247 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 TIFAQ96CG3 184 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 DHTKD1Q96HY7 919 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-208ENST00000564247 FAM161BQ96MY7 647 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 DNAJC25Q9H1X3 360 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 MAPK8IP1Q9UQF2 711 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 PPP1R3GB7ZBB8 358 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 EIF3DO15371 548 aaKnown RBP eCLIP18.63■□□□□ 0.57
CMTM3-208ENST00000564247 ATP2A2P16615 1042 aaKnown RBP18.63■□□□□ 0.57
CMTM3-208ENST00000564247 PRCPP42785 496 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 NCKAP1LP55160 1127 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 POU5F1BQ06416 359 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 RNF149Q8NC42 400 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 DNAJB3Q8WWF6 145 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 BSNDQ8WZ55 320 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 C2orf40Q9H1Z8 148 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 ST6GALNAC4Q9H4F1 302 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 MSRAQ9UJ68 235 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 PHLPP2Q6ZVD8 1323 aa18.63■□□□□ 0.57
CMTM3-208ENST00000564247 PTPRSQ13332 1948 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 K7ERI5 159 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 VTNP04004 478 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 MYBP10242 640 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 PHKA2P46019 1235 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 EFNA5P52803 228 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 CAPSQ13938 189 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 KLHL10Q6JEL2 608 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 KSR1Q8IVT5 923 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 NLRP7Q8WX94 980 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 HVCN1Q96D96 273 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 NLRP4Q96MN2 994 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 ACCSQ96QU6 501 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 FIZ1Q96SL8 496 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 TMEM206Q9H813 350 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 EXOC7Q9UPT5 735 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 UBE4BO95155 1302 aa18.62■□□□□ 0.57
CMTM3-208ENST00000564247 CHD7Q9P2D1 2997 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 ABHD14A-ACY1A0A1B0GW23 586 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 M0QZ92 97 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 EFCAB14O75071 495 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 PRPF6O94906 941 aaKnown RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 ZNF165P49910 485 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 NLRP11P59045 1033 aaKnown RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 GTF2BQ00403 316 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 STRN3Q13033 797 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 ZC2HC1CQ53FD0 456 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 EPM2AIP1Q7L775 607 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 SYCP3Q8IZU3 236 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 TMEM161BQ8NDZ6 487 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 SCFD1Q8WVM8 642 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 CDX2Q99626 313 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-208ENST00000564247 TSG101Q99816 390 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 ZNF576Q9H609 170 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 TMEM134Q9H6X4 195 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 PCDHA11Q9Y5I1 949 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
CMTM3-208ENST00000564247 BICDL2A1A5D9 508 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 CTSHP09668 335 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 CD44P16070 742 aaKnown RBP18.6■□□□□ 0.57
CMTM3-208ENST00000564247 KCNJ6P48051 423 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 GPC3P51654 580 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 CASP5P51878 434 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 WDR5P61964 334 aaKnown RBP18.6■□□□□ 0.57
CMTM3-208ENST00000564247 PAK1Q13153 545 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 IKBKEQ14164 716 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 TCTN1Q2MV58 587 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 PLEKHG4Q58EX7 1191 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 GCOM2Q9BZD3 368 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-208ENST00000564247 INO80BQ9C086 356 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-208ENST00000564247 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 TBX20Q9UMR3 447 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
CMTM3-208ENST00000564247 MICAL3Q7RTP6 2002 aa18.6■□□□□ 0.57
CMTM3-208ENST00000564247 SIP14410 1827 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 A0A087WZ62 844 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms