RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TMEM173Q86WV6 379 aaPredicted RBP19.65■□□□□ 0.74
NME3-205ENST00000563854 NOSTRINQ8IVI9 506 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 SMRP1Q8NCR6 262 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 NRDE2Q9H7Z3 1164 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 RSAD1Q9HA92 442 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 TUFT1Q9NNX1 390 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 GPRC5CQ9NQ84 441 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 DNAJB4Q9UDY4 337 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 USP15Q9Y4E8 981 aaPredicted RBP19.65■□□□□ 0.74
NME3-205ENST00000563854 FSD2A1L4K1 749 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 PI4K2BG5E9Z4 385 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 SPATA31C1P0DKV0 1188 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 GLRA2P23416 452 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 PTENP60484 403 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 NCBP1Q09161 790 aaKnown RBP19.64■□□□□ 0.73
NME3-205ENST00000563854 COASYQ13057 564 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 CATSPER3Q86XQ3 398 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 ERMNQ8TAM6 284 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 RSPH1Q8WYR4 309 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 LRFN3Q9BTN0 628 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 APOL6Q9BWW8 343 aa19.64■□□□□ 0.73
NME3-205ENST00000563854 EIF2AQ9BY44 585 aaKnown RBP19.64■□□□□ 0.73
NME3-205ENST00000563854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.63■□□□□ 0.73
NME3-205ENST00000563854 LRRIQ4A6NIV6 560 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 ST18O60284 1047 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 EYA4O95677 639 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 POMCP01189 267 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 ITGA4P13612 1032 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 ARL2P36404 184 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 SLC11A1P49279 550 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 MBTD1Q05BQ5 628 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 BMS1Q14692 1282 aaKnown RBP19.63■□□□□ 0.73
NME3-205ENST00000563854 RABEP1Q15276 862 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 NOTUMQ6P988 496 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 ZNF280BQ86YH2 543 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 VPS52Q8N1B4 723 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 TMEM87AQ8NBN3 555 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 BCL7CQ8WUZ0 217 aaPredicted RBP19.63■□□□□ 0.73
NME3-205ENST00000563854 AUTS2Q8WXX7 1259 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 FAM193BQ96PV7 902 aaPredicted RBP19.63■□□□□ 0.73
NME3-205ENST00000563854 TRIM6Q9C030 488 aaPredicted RBP19.63■□□□□ 0.73
NME3-205ENST00000563854 IPPQ9Y573 584 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 C5orf42Q9H799 3197 aa19.63■□□□□ 0.73
NME3-205ENST00000563854 CNTNAP2Q9UHC6 1331 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 ARHGEF35A5YM69 484 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 C19orf67A6NJJ6 358 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 DCXO43602 365 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 B4GALT3O60512 393 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 CXCL14O95715 111 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 GALTP07902 379 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 ALADP13716 330 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 AFF1P51825 1210 aaKnown RBP19.62■□□□□ 0.73
NME3-205ENST00000563854 ORC2Q13416 577 aaPredicted RBP19.62■□□□□ 0.73
NME3-205ENST00000563854 MRPL10Q7Z7H8 261 aaKnown RBP19.62■□□□□ 0.73
NME3-205ENST00000563854 CDR2LQ86X02 465 aaPredicted RBP19.62■□□□□ 0.73
NME3-205ENST00000563854 IGSF21Q96ID5 467 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 NACC1Q96RE7 527 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 UPF2Q9HAU5 1272 aaKnown RBP19.62■□□□□ 0.73
NME3-205ENST00000563854 C11orf16Q9NQ32 467 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 HES2Q9Y543 173 aa19.62■□□□□ 0.73
NME3-205ENST00000563854 C2orf71A6NGG8 1288 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 B4GALT5O43286 388 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
NME3-205ENST00000563854 AXLP30530 894 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 CCT6AP40227 531 aaKnown RBP19.61■□□□□ 0.73
NME3-205ENST00000563854 MLH1P40692 756 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 ANKRD54Q6NXT1 300 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 MRPL43Q8N983 215 aaKnown RBP19.61■□□□□ 0.73
NME3-205ENST00000563854 SMG8Q8ND04 991 aaKnown RBP19.61■□□□□ 0.73
NME3-205ENST00000563854 CNNM3Q8NE01 707 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 POLR3CQ9BUI4 534 aaPredicted RBP19.61■□□□□ 0.73
NME3-205ENST00000563854 CSRNP2Q9H175 543 aa19.61■□□□□ 0.73
NME3-205ENST00000563854 DDHD2O94830 711 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 SSBP05455 408 aaKnown RBP eCLIP19.6■□□□□ 0.73
NME3-205ENST00000563854 XRCC6P12956 609 aaKnown RBP eCLIP19.6■□□□□ 0.736e-11■■■■□ 23.7
NME3-205ENST00000563854 ARF4P18085 180 aaPredicted RBP19.6■□□□□ 0.73
NME3-205ENST00000563854 LIG1P18858 919 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 RPA1P27694 616 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 TRAPPC10P48553 1259 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 PCBP1Q15365 356 aaKnown RBP eCLIP19.6■□□□□ 0.73
NME3-205ENST00000563854 TMEM132AQ24JP5 1023 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 MCTP1Q6DN14 999 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 IFNLR1Q8IU57 520 aaPredicted RBP19.6■□□□□ 0.73
NME3-205ENST00000563854 MCPH1Q8NEM0 835 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 CCDC51Q96ER9 411 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 RPGRIP1Q96KN7 1286 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 ZBP1Q9H171 429 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 RNF39Q9H2S5 420 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 NXF3Q9H4D5 531 aaKnown RBP19.6■□□□□ 0.73
NME3-205ENST00000563854 MUTYHQ9UIF7 546 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 DBR1Q9UK59 544 aaKnown RBP19.6■□□□□ 0.73
NME3-205ENST00000563854 KIF3AQ9Y496 699 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 HCFC2Q9Y5Z7 792 aa19.6■□□□□ 0.73
NME3-205ENST00000563854 CARNS1A5YM72 827 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 GPR37L1O60883 481 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 NPTXRO95502 500 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 SP100P23497 879 aaPredicted RBP19.59■□□□□ 0.73
NME3-205ENST00000563854 POU5F1BQ06416 359 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 AMHR2Q16671 573 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms