RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 HOXA11P31270 313 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 SPECC1Q5M775 1068 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 POTEHQ6S545 545 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 PPFIBP1Q86W92 1011 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 TMTC2Q8N394 836 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 ZNF713Q8N859 430 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 PJA1Q8NG27 643 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 RUBCNQ92622 972 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 NELL1Q92832 810 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 FAM167AQ96KS9 214 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 ZMYND12Q9H0C1 365 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 IFT122Q9HBG6 1241 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 RXFP1Q9HBX9 757 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 CEP131Q9UPN4 1083 aa11.7□□□□□ -0.54
SF3B3-204ENST00000563739 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 MTF2Q9Y483 593 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-204ENST00000563739 CCDC195A0A1B0GUA6 201 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 SOD2P04179 222 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 KLRC2P26717 231 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 DSC1Q08554 894 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 AAMPQ13685 434 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 RTN1Q16799 776 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 PRR16Q569H4 304 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 SMG8Q8ND04 991 aaKnown RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 KCNG4Q8TDN1 519 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 RUFY2Q8WXA3 655 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 SLC5A5Q92911 643 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 FGF14Q92915 247 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 NIFKQ9BYG3 293 aaKnown RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 PARD6AQ9NPB6 346 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 MIOSQ9NXC5 875 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 DACT1Q9NYF0 836 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 RALYQ9UKM9 306 aaKnown RBP11.69□□□□□ -0.54
SF3B3-204ENST00000563739 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
SF3B3-204ENST00000563739 C2CD2LO14523 706 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 PSMD10O75832 226 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 LAMP2P13473 410 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 GBP2P32456 591 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-204ENST00000563739 ZNF76P36508 570 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 ATXN1P54253 815 aaKnown RBP11.68□□□□□ -0.54
SF3B3-204ENST00000563739 STARD6P59095 220 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 ADCK5Q3MIX3 580 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 MTERF2Q49AM1 385 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 TWF2Q6IBS0 349 aaKnown RBP11.68□□□□□ -0.54
SF3B3-204ENST00000563739 GLB1LQ6UWU2 654 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 COLGALT2Q8IYK4 626 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 RSPH1Q8WYR4 309 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 TMEM175Q9BSA9 504 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 CHST7Q9NS84 486 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 RBM28Q9NW13 759 aaKnown RBP11.68□□□□□ -0.54
SF3B3-204ENST00000563739 WRAP73Q9P2S5 460 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-204ENST00000563739 PCDHB2Q9Y5E7 798 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 ZZEF1O43149 2961 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 SPEGQ15772 3267 aa11.68□□□□□ -0.54
SF3B3-204ENST00000563739 LILRB5O75023 590 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 POMCP01189 267 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 TDGF1P13385 188 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 TMOD1P28289 359 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
SF3B3-204ENST00000563739 NTHL1P78549 312 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 DSG1Q02413 1049 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 FZD5Q13467 585 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 PARM1Q6UWI2 310 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 SPATA31D4Q6ZUB0 917 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 ANO5Q75V66 913 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 GSTCDQ8NEC7 633 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 SMG7Q92540 1137 aaKnown RBP11.67□□□□□ -0.54
SF3B3-204ENST00000563739 MBOAT7Q96N66 472 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 GCOM2Q9BZD3 368 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-204ENST00000563739 NT5C3AQ9H0P0 336 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
SF3B3-204ENST00000563739 PRG3Q9Y2Y8 225 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-204ENST00000563739 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
SF3B3-204ENST00000563739 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
SF3B3-204ENST00000563739 ZBTB43O43298 467 aa11.66□□□□□ -0.54
SF3B3-204ENST00000563739 TGM5O43548 720 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms