RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 PRKCIP41743 596 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 IRAK1P51617 712 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 NPEPPSP55786 919 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 PEX3P56589 373 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 ITGB3BPQ13352 177 aaPredicted RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 STXBP4Q6ZWJ1 553 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 CAVIN3Q969G5 261 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
CYLD-205ENST00000563629 MXRA8Q9BRK3 442 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 RPAP3Q9H6T3 665 aaPredicted RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 COG5Q9UP83 839 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 SLC26A4O43511 780 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 SETQ01105 290 aaPredicted RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 MAP2K1Q02750 393 aaPredicted RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 MAPK7Q13164 816 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 MTMR1Q13613 665 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 GLE1Q53GS7 698 aaKnown RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 TREML2Q5T2D2 321 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 PHLDB2Q86SQ0 1253 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 CPNE8Q86YQ8 564 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 SCYL3Q8IZE3 742 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 PPM1KQ8N3J5 372 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 PIK3R5Q8WYR1 880 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 POP1Q99575 1024 aaKnown RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 CTTNBP2NLQ9P2B4 639 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 RNF14Q9UBS8 474 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 FEZ2Q9UHY8 353 aaPredicted RBP8.37□□□□□ -1.07
CYLD-205ENST00000563629 AMFRQ9UKV5 643 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
CYLD-205ENST00000563629 DOCK5Q9H7D0 1870 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 SMIM23A6NLE4 172 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 BACH1O14867 736 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 CTNNA1P35221 906 aaKnown RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 MARCKSL1P49006 195 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 C10orf76Q5T2E6 689 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 DCAF15Q66K64 600 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ZNF280CQ8ND82 737 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.36□□□□□ -1.07
CYLD-205ENST00000563629 OLIG1Q8TAK6 271 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ATG4CQ96DT6 458 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 TAAR1Q96RJ0 339 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 SH3GL2Q99962 352 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 STK33Q9BYT3 514 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ERVK-5Q9HDB9 667 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 RIPK3Q9Y572 518 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 SNCAIPQ9Y6H5 919 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ZNF536O15090 1300 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 GRIN2DO15399 1336 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 TULP2O00295 520 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ATP9AO75110 1047 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 PPFIA4O75335 1185 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ECHS1P30084 290 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 YWHABP31946 246 aaKnown RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 HSD17B3P37058 310 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 VAMP7P51809 220 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 BACE1P56817 501 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 MRPS9P82933 396 aaKnown RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 SF3A3Q12874 501 aaKnown RBP eCLIP8.36□□□□□ -1.07
CYLD-205ENST00000563629 GRM1Q13255 1194 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 SUPT20HL1Q3ZLR7 823 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 XKR9Q5GH70 373 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ALS2CLQ60I27 953 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 RPUSD2Q8IZ73 545 aaKnown RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 RFFLQ8WZ73 363 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 GLG1Q92896 1179 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 PBKQ96KB5 322 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 LRRC4CQ9HCJ2 640 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 HSPBP1Q9NZL4 362 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 LARSQ9P2J5 1176 aaKnown RBP8.36□□□□□ -1.07
CYLD-205ENST00000563629 FEM1BQ9UK73 627 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 FBXL5Q9UKA1 691 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 ODF2LQ9ULJ1 636 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
CYLD-205ENST00000563629 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
CYLD-205ENST00000563629 TNFRSF8P28908 595 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 RARRES1P49788 294 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 ZNF131P52739 623 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 RPS6P62753 249 aaKnown RBP8.35□□□□□ -1.07
CYLD-205ENST00000563629 MESDQ14696 234 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 HAUS6Q7Z4H7 955 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 CBWD2Q8IUF1 395 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 UHMK1Q8TAS1 419 aaKnown RBP8.35□□□□□ -1.07
CYLD-205ENST00000563629 PLEKHO2Q8TD55 490 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 ACTRT1Q8TDG2 376 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 LMBR1Q8WVP7 490 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 KRT35Q92764 455 aa8.35□□□□□ -1.07
CYLD-205ENST00000563629 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
CYLD-205ENST00000563629 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms