RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 BLOC1S4Q9NUP1 217 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 COG5Q9UP83 839 aa16.4■□□□□ 0.22
RPUSD1-204ENST00000563560 FGF18O76093 207 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 SKIP12755 728 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 LAG3P18627 525 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 IBSPP21815 317 aaPredicted RBP16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 PBX3P40426 434 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 NAMPTP43490 491 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 SLC12A3P55017 1021 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 PTPROQ16827 1216 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 KCNT2Q6UVM3 1135 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 TAS1R3Q7RTX0 852 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 TMEM173Q86WV6 379 aaPredicted RBP16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 GSTCDQ8NEC7 633 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 RSPH1Q8WYR4 309 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 AK8Q96MA6 479 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 CSRNP2Q9H175 543 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 TBC1D13Q9NVG8 400 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 FBXO2Q9UK22 296 aaPredicted RBP16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 IPPQ9Y573 584 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 PCDHGC5Q9Y5F6 944 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 CNTNAP2Q9UHC6 1331 aa16.39■□□□□ 0.21
RPUSD1-204ENST00000563560 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 SLC26A4O43511 780 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 STX6O43752 255 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 EFEMP2O95967 443 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 BMP15O95972 392 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 KCNQ1P51787 676 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 ERVFC1P60507 584 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 UBE3AQ05086 875 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 HYAL1Q12794 435 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 TJAP1Q5JTD0 557 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 ADGRD2Q7Z7M1 963 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 SLC39A11Q8N1S5 342 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 RNF169Q8NCN4 708 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 BCL7CQ8WUZ0 217 aaPredicted RBP16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 KCNN1Q92952 543 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 NRDE2Q9H7Z3 1164 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 ARHGAP28Q9P2N2 729 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
RPUSD1-204ENST00000563560 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 LONP1P36776 959 aaKnown RBP16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 KCNC3Q14003 757 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 LONRF3Q496Y0 759 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 NOMO2Q5JPE7 1267 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 NOTUMQ6P988 496 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 CDR2LQ86X02 465 aaPredicted RBP16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 HLA-CQ95604 372 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 PABPC5Q96DU9 382 aaKnown RBP16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 CCDC43Q96MW1 224 aaKnown RBP16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 KIFC3Q9BVG8 833 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 PDZD7Q9H5P4 517 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 HES2Q9Y543 173 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
RPUSD1-204ENST00000563560 CITO14578 2027 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 ACKR2O00590 384 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 ABLIM1O14639 778 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 DDHD2O94830 711 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 ERLIN2O94905 339 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 CABP7Q86V35 215 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 MRPL9Q9BYD2 267 aaKnown RBP16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 CCSER1Q9C0I3 900 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 NT5C3AQ9H0P0 336 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 C2orf40Q9H1Z8 148 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 AAASQ9NRG9 546 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 DNAJB4Q9UDY4 337 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 PCDHB12Q9Y5F1 795 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 TRIOO75962 3097 aa16.36■□□□□ 0.21
RPUSD1-204ENST00000563560 HIP1RO75146 1068 aa16.35■□□□□ 0.21
RPUSD1-204ENST00000563560 GALTP07902 379 aa16.35■□□□□ 0.21
RPUSD1-204ENST00000563560 NPTX2P47972 431 aa16.35■□□□□ 0.21
RPUSD1-204ENST00000563560 NASPP49321 788 aaPredicted RBP16.35■□□□□ 0.21
RPUSD1-204ENST00000563560 BCAR1P56945 870 aa16.35■□□□□ 0.21
RPUSD1-204ENST00000563560 DLX2Q07687 328 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms