RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ST20-MTHFSA0A0A6YYL1 179 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 POM121BA6NF01 834 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 CAPN8A6NHC0 703 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 TRIM64CA6NLI5 447 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 MASP2O00187 686 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 FFAR2O15552 330 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 MGEA5O60502 916 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 NDUFS2O75306 463 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 CLEC3AO75596 197 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 AGXTP21549 392 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 GRK2P25098 689 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 AGFG1P52594 562 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 PGS1Q32NB8 556 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 ANO6Q4KMQ2 910 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 HECTD3Q5T447 861 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 MEX3CQ5U5Q3 659 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 CEP135Q66GS9 1140 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 DSTYKQ6XUX3 929 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 RASGRP2Q7LDG7 609 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 FBXO11Q86XK2 927 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 IL22RA1Q8N6P7 574 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 EFHBQ8N7U6 833 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 BAHD1Q8TBE0 780 aaPredicted RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 RRP36Q96EU6 259 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 DESI2Q9BSY9 194 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 KATNAL1Q9BW62 490 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 LSM14BQ9BX40 385 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 NKX2-4Q9H2Z4 354 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 NOL6Q9H6R4 1146 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 STARD7Q9NQZ5 370 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 OLA1Q9NTK5 396 aaKnown RBP5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 WHRNQ9P202 907 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 LRFN1Q9P244 771 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 TJP2Q9UDY2 1190 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 KNSTRNQ9Y448 316 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 STRCQ7RTU9 1775 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 ARHGEF10O15013 1369 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 USP47Q96K76 1375 aa5.91□□□□□ -1.46
VPS35P1-201ENST00000563400 RALGAPBQ86X10 1494 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 DOK2O60496 412 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 FGF18O76093 207 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 EOMESO95936 686 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MYF5P13349 255 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 SLC9A1P19634 815 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MUTP22033 750 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 HOXC12P31275 282 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MAN2A2P49641 1150 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 ITGA8P53708 1063 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 KRT32Q14532 448 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MBTPS1Q14703 1052 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 PPP2R5DQ14738 602 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 GRIK5Q16478 980 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 PFKFB4Q16877 469 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 POMZP3Q6PJE2 187 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 LMBR1LQ6UX01 489 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 FAM47EQ6ZV65 393 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 GALNT13Q8IUC8 556 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 CARNMT1Q8N4J0 409 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MGARPQ8TDB4 240 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 SMARCC1Q92922 1105 aaPredicted RBP5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 LTV1Q96GA3 475 aaPredicted RBP5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 MRPL9Q9BYD2 267 aaKnown RBP5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 CELF4Q9BZC1 486 aaKnown RBP5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 CCDC86Q9H6F5 360 aaKnown RBP5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 ZSWIM5Q9P217 1185 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 ABCF2Q9UG63 623 aa5.9□□□□□ -1.46
VPS35P1-201ENST00000563400 LRRC7Q96NW7 1537 aa5.9□□□□□ -1.47
VPS35P1-201ENST00000563400 CHD2O14647 1828 aaKnown RBP5.9□□□□□ -1.47
VPS35P1-201ENST00000563400 TTC21AQ8NDW8 1320 aa5.9□□□□□ -1.47
VPS35P1-201ENST00000563400 MSCO60682 206 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 KRT37O76014 449 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 APPP05067 770 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 HARSP12081 509 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 HNRNPLP14866 589 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 TSHRP16473 764 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 GBP1P32455 592 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 HSPA7P48741 367 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 DNM2P50570 870 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 DRG2P55039 364 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SPARCL1Q14515 664 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 PSMD6Q15008 389 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SUZ12Q15022 739 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SMAD2Q15796 467 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZC3H12AQ5D1E8 599 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 TOR2AQ5JU69 321 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 HAUS3Q68CZ6 603 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 FAM117BQ6P1L5 589 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 KRT28Q7Z3Y7 464 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 LRRTM4Q86VH4 590 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MCATQ8IVS2 390 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CISD2Q8N5K1 135 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ARL6IP6Q8N6S5 226 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 KREMEN2Q8NCW0 462 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms