RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SPG21Q9NZD8 308 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 PUF60Q9UHX1 559 aaKnown RBP21.06■□□□□ 0.96
TRADD-203ENST00000563348 A0A1B0GUA9 196 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 BMP15O95972 392 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 SYT1P21579 422 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 KCNA5P22460 613 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 PPM1AP35813 382 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 CTC1Q2NKJ3 1217 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 LEXMQ3ZCV2 418 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 HYIQ5T013 277 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 PPP4R3CPQ6ZMV5 832 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 ZBTB8OSQ8IWT0 167 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 SMG8Q8ND04 991 aaKnown RBP21.05■□□□□ 0.96
TRADD-203ENST00000563348 ADAMTS19Q8TE59 1207 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 MRPS27Q92552 414 aaKnown RBP21.05■□□□□ 0.96
TRADD-203ENST00000563348 KIFAP3Q92845 792 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 PPP2R3CQ969Q6 453 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 SNX21Q969T3 373 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 EIF2AQ9BY44 585 aaKnown RBP21.05■□□□□ 0.96
TRADD-203ENST00000563348 C2orf40Q9H1Z8 148 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 POLD4Q9HCU8 107 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 TLR9Q9NR96 1032 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 TBC1D13Q9NVG8 400 aa21.05■□□□□ 0.96
TRADD-203ENST00000563348 CNTNAP2Q9UHC6 1331 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 KIAA1671Q9BY89 1806 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 B4GALT5O43286 388 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PBX3P40426 434 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 NAMPTP43490 491 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 ALDH7A1P49419 539 aaKnown RBP21.04■□□□□ 0.96
TRADD-203ENST00000563348 BCAR1P56945 870 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 ERVFC1P60507 584 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 KRT17Q04695 432 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PPP2R5AQ15172 486 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 FAM187BQ17R55 369 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PDE12Q6L8Q7 609 aaKnown RBP21.04■□□□□ 0.96
TRADD-203ENST00000563348 KCNK18Q7Z418 384 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 SLC39A11Q8N1S5 342 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 MICAL1Q8TDZ2 1067 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PRIMPOLQ96LW4 560 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 AK8Q96MA6 479 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PNMA5Q96PV4 448 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 RSAD1Q9HA92 442 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 UBN1Q9NPG3 1134 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 PRMT7Q9NVM4 692 aaPredicted RBP21.04■□□□□ 0.96
TRADD-203ENST00000563348 INPP5FQ9Y2H2 1132 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 IPPQ9Y573 584 aa21.04■□□□□ 0.96
TRADD-203ENST00000563348 CARNS1A5YM72 827 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 ITGA4P13612 1032 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 ZRSR1Q15695 479 aaKnown RBP21.03■□□□□ 0.96
TRADD-203ENST00000563348 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.03■□□□□ 0.96
TRADD-203ENST00000563348 DEPTORQ8TB45 409 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 IFT74Q96LB3 600 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 UHRF1Q96T88 793 aaPredicted RBP21.03■□□□□ 0.96
TRADD-203ENST00000563348 RNF39Q9H2S5 420 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 IGFLR1Q9H665 355 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 NRDE2Q9H7Z3 1164 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 CLDND1Q9NY35 253 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 KANSL3Q9P2N6 904 aa21.03■□□□□ 0.96
TRADD-203ENST00000563348 FSCN2O14926 492 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 GTF2F1P35269 517 aaKnown RBP eCLIP21.02■□□□□ 0.969e-11■■■■■ 43.8
TRADD-203ENST00000563348 LTBRP36941 435 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 AFF1P51825 1210 aaKnown RBP21.02■□□□□ 0.96
TRADD-203ENST00000563348 RNASELQ05823 741 aaKnown RBP21.02■□□□□ 0.96
TRADD-203ENST00000563348 ADAM15Q13444 863 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.96
TRADD-203ENST00000563348 RINT1Q6NUQ1 792 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 EP400NLQ6ZTU2 488 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 C1orf186Q6ZWK4 172 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 ADGRD2Q7Z7M1 963 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 URGCPQ8TCY9 931 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 NT5C3AQ9H0P0 336 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 FOXD4L1Q9NU39 408 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 PCDHGC5Q9Y5F6 944 aa21.02■□□□□ 0.96
TRADD-203ENST00000563348 NT5C1B-RDH14C9J2C7 533 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 H3BQ06 376 aaPredicted RBP21.01■□□□□ 0.95
TRADD-203ENST00000563348 ACKR2O00590 384 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 SLC26A4O43511 780 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 ZC3H11AO75152 810 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRADD-203ENST00000563348 GALTP07902 379 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 RESTQ13127 1097 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 MAPK6Q16659 721 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 SLC27A1Q6PCB7 646 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 CDR2LQ86X02 465 aaPredicted RBP21.01■□□□□ 0.95
TRADD-203ENST00000563348 ZNF280BQ86YH2 543 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 RUSC1Q9BVN2 902 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 TRIM6Q9C030 488 aaPredicted RBP21.01■□□□□ 0.95
TRADD-203ENST00000563348 CCDC113Q9H0I3 377 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 TLE6Q9H808 572 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 NGRNQ9NPE2 291 aaKnown RBP21.01■□□□□ 0.95
TRADD-203ENST00000563348 MTMR6Q9Y217 621 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 HES2Q9Y543 173 aa21.01■□□□□ 0.95
TRADD-203ENST00000563348 TCF20Q9UGU0 1960 aaKnown RBP21.01■□□□□ 0.95
TRADD-203ENST00000563348 INPPL1O15357 1258 aa21■□□□□ 0.95
TRADD-203ENST00000563348 DDHD2O94830 711 aa21■□□□□ 0.95
TRADD-203ENST00000563348 NRIP1P48552 1158 aa21■□□□□ 0.95
TRADD-203ENST00000563348 EFNA5P52803 228 aa21■□□□□ 0.95
TRADD-203ENST00000563348 PUS10Q3MIT2 529 aaKnown RBP21■□□□□ 0.95
TRADD-203ENST00000563348 TMEM119Q4V9L6 283 aa21■□□□□ 0.95
TRADD-203ENST00000563348 RBM23Q86U06 439 aaKnown RBP21■□□□□ 0.95
TRADD-203ENST00000563348 CABP7Q86V35 215 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms