RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LXNQ9BS40 222 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 TMEM109Q9BVC6 243 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 TIPINQ9BVW5 301 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 IKZF4Q9H2S9 585 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 TDRD3Q9H7E2 651 aaKnown RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.13□□□□□ -0.15
USB1-207ENST00000563149 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 CNOT8Q9UFF9 292 aaKnown RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 DBR1Q9UK59 544 aaKnown RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 COG5Q9UP83 839 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 ATP8A1Q9Y2Q0 1164 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 NR2E1Q9Y466 385 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 KIAA0391O15091 583 aaKnown RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 PTGIRP43119 386 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 IFT88Q13099 833 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 SEL1L2Q5TEA6 688 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 CSRNP1Q96S65 589 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 IWS1Q96ST2 819 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 ZSWIM1Q9BR11 485 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 ST6GALNAC4Q9H4F1 302 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 TAS2R14Q9NYV8 317 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 CTTNBP2NLQ9P2B4 639 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 WRAP73Q9P2S5 460 aaPredicted RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 MTRF1LQ9UGC7 380 aaKnown RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
USB1-207ENST00000563149 EMSYQ7Z589 1322 aa14.12□□□□□ -0.15
USB1-207ENST00000563149 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 K7ENM7 598 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 IPO5O00410 1097 aaKnown RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 FTLP02792 175 aaPredicted RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 P4HBP07237 508 aaKnown RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 ARP10275 920 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ALAS1P13196 640 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 TAL1P17542 331 aaPredicted RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 SMTNP53814 917 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 TNIP1Q15025 636 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 CYP1B1Q16678 543 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 C6orf118Q5T5N4 469 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 DENND2CQ68D51 928 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 CACNA2D3Q8IZS8 1091 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 DAW1Q8N136 415 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 TATDN2Q93075 761 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 SEC16BQ96JE7 1060 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 TAOK3Q9H2K8 898 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ERVK-5Q9HDB9 667 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ZNF536O15090 1300 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 MYH11P35749 1972 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 GOLGA6L7A0A1B0GV03 622 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 TMOD1P28289 359 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ADCY2Q08462 1091 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 SLMAPQ14BN4 828 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 LACTB2Q53H82 288 aaPredicted RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 ERMARDQ5T6L9 678 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 FBXW10Q5XX13 1052 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 STYK1Q6J9G0 422 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 PADI6Q6TGC4 694 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ZDHHC24Q6UX98 284 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 MIER3Q7Z3K6 550 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 RPUSD2Q8IZ73 545 aaKnown RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ALG3Q92685 438 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 ZNF622Q969S3 477 aaKnown RBP eCLIP14.11□□□□□ -0.15
USB1-207ENST00000563149 TRIM31Q9BZY9 425 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
USB1-207ENST00000563149 TMOD2Q9NZR1 351 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 MTUS1Q9ULD2 1270 aa14.11□□□□□ -0.15
USB1-207ENST00000563149 LYPLA2O95372 231 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 AGTP01019 485 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 PLS3P13797 630 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 ECE1P42892 770 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 PEX5P50542 639 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 ZNF211Q13398 564 aaPredicted RBP14.1□□□□□ -0.15
USB1-207ENST00000563149 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
USB1-207ENST00000563149 GKAP1Q5VSY0 366 aaPredicted RBP14.1□□□□□ -0.15
USB1-207ENST00000563149 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 CYFIP1Q7L576 1253 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 PALB2Q86YC2 1186 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 ARHGEF19Q8IW93 802 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 PRELID2Q8N945 189 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 RDH13Q8NBN7 331 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
USB1-207ENST00000563149 EPB41L4BQ9H329 900 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 SCN9AQ15858 1988 aa14.1□□□□□ -0.15
USB1-207ENST00000563149 AFF2P51816 1311 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 CAND2O75155 1236 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 LRRN2O75325 713 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 GHRP10912 638 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 MMP13P45452 471 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms