RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 NAPAP54920 295 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 CDC42EP1Q00587 391 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
CKLF-208ENST00000563092 DRP2Q13474 957 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 ZC3H14Q6PJT7 736 aaKnown RBP9.4□□□□□ -0.9
CKLF-208ENST00000563092 GLB1LQ6UWU2 654 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 NFXL1Q6ZNB6 911 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 C1orf210Q8IVY1 113 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 RSAD2Q8WXG1 361 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 ZNF707Q96C28 371 aaPredicted RBP9.4□□□□□ -0.9
CKLF-208ENST00000563092 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 MYADMQ96S97 322 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 ZNF577Q9BSK1 485 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 EMILIN2Q9BXX0 1053 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 TBC1D17Q9HA65 648 aa9.4□□□□□ -0.9
CKLF-208ENST00000563092 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
CKLF-208ENST00000563092 CLUHO75153 1309 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 DDHD2O94830 711 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 CFHP08603 1231 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 ZNF76P36508 570 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 RAB27AP51159 221 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 STARD6P59095 220 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 PRKCEQ02156 737 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 NECTIN1Q15223 517 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 ZNF528Q3MIS6 628 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 APOA5Q6Q788 366 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 AGMOQ6ZNB7 445 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 MRPL10Q7Z7H8 261 aaKnown RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 MICU3Q86XE3 530 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 RAB11FIP4Q86YS3 637 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 KCNG4Q8TDN1 519 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 HDAC7Q8WUI4 952 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 LPPQ93052 612 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 TMEM175Q9BSA9 504 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 LSG1Q9H089 658 aaKnown RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 RXFP1Q9HBX9 757 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 RBM28Q9NW13 759 aaKnown RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 SIT1Q9Y3P8 196 aa9.39□□□□□ -0.91
CKLF-208ENST00000563092 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
CKLF-208ENST00000563092 TPRP12270 2363 aaKnown RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 SLC27A2O14975 620 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 INPPL1O15357 1258 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 SOD2P04179 222 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 DCNP07585 359 aaKnown RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 KLRC2P26717 231 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 CA8P35219 290 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 HTR4Q13639 388 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
CKLF-208ENST00000563092 UGCGQ16739 394 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 KIAA0319Q5VV43 1072 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 B3GNT9Q6UX72 402 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 ZNF410Q86VK4 478 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 GPR65Q8IYL9 337 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 DCLK2Q8N568 766 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 PJA1Q8NG27 643 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 RIN2Q8WYP3 895 aaPredicted RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 STAMQ92783 540 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 NELL1Q92832 810 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 ZNF668Q96K58 619 aaPredicted RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 RPS6KC1Q96S38 1066 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 MAN1C1Q9NR34 630 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 ARHGEF3Q9NR81 526 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 MRPL17Q9NRX2 175 aaKnown RBP9.38□□□□□ -0.91
CKLF-208ENST00000563092 MARCH5Q9NX47 278 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 CA14Q9ULX7 337 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
CKLF-208ENST00000563092 DOCK8Q8NF50 2099 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 TEX28O15482 410 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 LAMP2P13473 410 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 TGM1P22735 817 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
CKLF-208ENST00000563092 RCAN1P53805 252 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 EXOSC10Q01780 885 aaKnown RBP9.37□□□□□ -0.91
CKLF-208ENST00000563092 PFKFB3Q16875 520 aaPredicted RBP9.37□□□□□ -0.91
CKLF-208ENST00000563092 RSPO4Q2I0M5 234 aaPredicted RBP9.37□□□□□ -0.91
CKLF-208ENST00000563092 JAKMIP3Q5VZ66 844 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 TWF2Q6IBS0 349 aaKnown RBP9.37□□□□□ -0.91
CKLF-208ENST00000563092 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
CKLF-208ENST00000563092 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 ZBTB44Q8NCP5 570 aa9.37□□□□□ -0.91
CKLF-208ENST00000563092 EXOC6Q8TAG9 804 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms