RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 CNTNAP2Q9UHC6 1331 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 TTLL13PA6NNM8 815 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 SPTLC2O15270 562 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 EDN1P05305 212 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 IBSPP21815 317 aaPredicted RBP20.64■□□□□ 0.89
CDH11-206ENST00000562998 IGFBP4P22692 258 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 CTNNB1P35222 781 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 NPTX2P47972 431 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 AGMOQ6ZNB7 445 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 ZBTB8OSQ8IWT0 167 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 RAD54LQ92698 747 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 CPB2Q96IY4 423 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 IFT74Q96LB3 600 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 TYW1Q9NV66 732 aaKnown RBP20.64■□□□□ 0.89
CDH11-206ENST00000562998 HCSTQ9UBK5 93 aa20.64■□□□□ 0.89
CDH11-206ENST00000562998 ACKR2O00590 384 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
CDH11-206ENST00000562998 DDIT3P35638 169 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 EFNA5P52803 228 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 GPM6BQ13491 265 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 STK38Q15208 465 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 NAALADL2Q58DX5 795 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 CNNM3Q8NE01 707 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 DEPTORQ8TB45 409 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 HELQQ8TDG4 1101 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 KCNN1Q92952 543 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 LPPQ93052 612 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 C11orf84Q9BUA3 381 aaPredicted RBP20.63■□□□□ 0.89
CDH11-206ENST00000562998 KIFC3Q9BVG8 833 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 EIF2AQ9BY44 585 aaKnown RBP20.63■□□□□ 0.89
CDH11-206ENST00000562998 ARHGAP28Q9P2N2 729 aa20.63■□□□□ 0.89
CDH11-206ENST00000562998 INPPL1O15357 1258 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 GTPBP6O43824 516 aaPredicted RBP20.62■□□□□ 0.89
CDH11-206ENST00000562998 OFD1O75665 1012 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 PEX3P56589 373 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 NCBP1Q09161 790 aaKnown RBP20.62■□□□□ 0.89
CDH11-206ENST00000562998 MCM6Q14566 821 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 MAPK6Q16659 721 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 RNF169Q8NCN4 708 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 SPIRE2Q8WWL2 714 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 LARP4BQ92615 738 aaKnown RBP20.62■□□□□ 0.89
CDH11-206ENST00000562998 PGBD4Q96DM1 585 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 STK17AQ9UEE5 414 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 PLAGL2Q9UPG8 496 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 IPPQ9Y573 584 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 ATG2AQ2TAZ0 1938 aa20.62■□□□□ 0.89
CDH11-206ENST00000562998 UNC80Q8N2C7 3258 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 A0A087X0B3 334 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 SFI1A8K8P3 1242 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDH11-206ENST00000562998 PRKCBP05771 671 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 PLS3P13797 630 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 ZNF131P52739 623 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 CAMK1Q14012 370 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 BECN1Q14457 450 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 AXDND1Q5T1B0 1012 aaPredicted RBP20.61■□□□□ 0.89
CDH11-206ENST00000562998 SLC27A1Q6PCB7 646 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 TAS1R3Q7RTX0 852 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 LRRC43Q8N309 656 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 MRPL38Q96DV4 380 aaKnown RBP20.61■□□□□ 0.89
CDH11-206ENST00000562998 ODF2LQ9ULJ1 636 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 MYH11P35749 1972 aa20.61■□□□□ 0.89
CDH11-206ENST00000562998 GRM6O15303 877 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 ITGB1P05556 798 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 DNM1Q05193 864 aaKnown RBP20.6■□□□□ 0.89
CDH11-206ENST00000562998 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 DMP1Q13316 513 aaPredicted RBP20.6■□□□□ 0.89
CDH11-206ENST00000562998 GIT2Q14161 759 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 NT5DC1Q5TFE4 455 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 GPBP1Q86WP2 473 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 ABI1Q8IZP0 508 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 KLHL23Q8NBE8 558 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 COLGALT1Q8NBJ5 622 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 REEP2Q9BRK0 252 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 MRPL9Q9BYD2 267 aaKnown RBP20.6■□□□□ 0.89
CDH11-206ENST00000562998 LMAN2LQ9H0V9 348 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 PDZD7Q9H5P4 517 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 DAXXQ9UER7 740 aaPredicted RBP20.6■□□□□ 0.89
CDH11-206ENST00000562998 CCDC39Q9UFE4 941 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 RCOR1Q9UKL0 485 aa20.6■□□□□ 0.89
CDH11-206ENST00000562998 RBM19Q9Y4C8 960 aaKnown RBP20.6■□□□□ 0.89
CDH11-206ENST00000562998 PHLPP2Q6ZVD8 1323 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 PLXNA4Q9HCM2 1894 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 CUTAO60888 179 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 LAG3P18627 525 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
CDH11-206ENST00000562998 PRPF4BQ13523 1007 aaKnown RBP20.59■□□□□ 0.89
CDH11-206ENST00000562998 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 NOMO2Q5JPE7 1267 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 GLB1LQ6UWU2 654 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 CDR2LQ86X02 465 aaPredicted RBP20.59■□□□□ 0.89
CDH11-206ENST00000562998 TMEM161BQ8NDZ6 487 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 SPPL3Q8TCT6 385 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 KCNG4Q8TDN1 519 aa20.59■□□□□ 0.89
CDH11-206ENST00000562998 RSAD1Q9HA92 442 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms