RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 A0A087WWV3 80 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 USO1O60763 962 aaKnown RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 CXCL14O95715 111 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 GALTP07902 379 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 RARRES1P49788 294 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 PTENP60484 403 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 NCBP1Q09161 790 aaKnown RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 PHF7Q9BWX1 381 aaPredicted RBP18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 DNAJB4Q9UDY4 337 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 HCFC2Q9Y5Z7 792 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
TNRC6A-209ENST00000562829 C2orf71A6NGG8 1288 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 TSPAN1O60635 241 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 HMGN5P82970 282 aaKnown RBP18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 CAPSQ13938 189 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 KCNC3Q14003 757 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 NOTUMQ6P988 496 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 TMEM184AQ6ZMB5 413 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 MAEAQ7L5Y9 396 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 MRPL10Q7Z7H8 261 aaKnown RBP18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 ASAP3Q8TDY4 903 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 AUTS2Q8WXX7 1259 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 FAM122AQ96E09 287 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 CPB2Q96IY4 423 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 ZSCAN31Q96LW9 406 aaPredicted RBP18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 ZBP1Q9H171 429 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 POLR3FQ9H1D9 316 aaPredicted RBP18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 C5orf42Q9H799 3197 aa18.66■□□□□ 0.58
TNRC6A-209ENST00000562829 POMCP01189 267 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 OR52Z1P0C646 297 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 ITGA4P13612 1032 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 HOXB8P17481 243 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 NCLP19338 710 aaKnown RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 AXLP30530 894 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 SLC11A1P49279 550 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 CBX2Q14781 532 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 PCBP1Q15365 356 aaKnown RBP eCLIP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 ZNF174Q15697 407 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 HERC4Q5GLZ8 1057 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 SYCE2Q6PIF2 218 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 DDX53Q86TM3 631 aaKnown RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 ZNF280BQ86YH2 543 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 CNNM3Q8NE01 707 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 ERMNQ8TAM6 284 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 BCL7CQ8WUZ0 217 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 SUSD6Q92537 303 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 APOL6Q9BWW8 343 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 EIF2AQ9BY44 585 aaKnown RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 TRIM6Q9C030 488 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 FOXP1Q9H334 677 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 SH2B1Q9NRF2 756 aaPredicted RBP18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 KANSL3Q9P2N6 904 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 IPPQ9Y573 584 aa18.65■□□□□ 0.58
TNRC6A-209ENST00000562829 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 B4GALT3O60512 393 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 CLASP2O75122 1294 aaKnown RBP18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 CTSAP10619 480 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 GLRA2P23416 452 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 ARL2P36404 184 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 PLA2G5P39877 138 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 MBTD1Q05BQ5 628 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 CCDC51Q96ER9 411 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 TUFT1Q9NNX1 390 aa18.64■□□□□ 0.57
TNRC6A-209ENST00000562829 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 MED24O75448 989 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 DDHD2O94830 711 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.576e-8■■■■■ 38.4
TNRC6A-209ENST00000562829 SP100P23497 879 aaPredicted RBP18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 RBM25P49756 843 aaKnown RBP18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 GIT2Q14161 759 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 CES5AQ6NT32 575 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 CATSPER3Q86XQ3 398 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 IFNLR1Q8IU57 520 aaPredicted RBP18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 HACE1Q8IYU2 909 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 SMG8Q8ND04 991 aaKnown RBP18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 FBXO18Q8NFZ0 1043 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 TMEM175Q9BSA9 504 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 CSRNP2Q9H175 543 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 S1PR5Q9H228 398 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 NOL7Q9UMY1 257 aaKnown RBP18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 FAN1Q9Y2M0 1017 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 HES2Q9Y543 173 aa18.63■□□□□ 0.57
TNRC6A-209ENST00000562829 ALDH2P05091 517 aa18.62■□□□□ 0.57
TNRC6A-209ENST00000562829 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
TNRC6A-209ENST00000562829 ARF4P18085 180 aaPredicted RBP18.62■□□□□ 0.57
TNRC6A-209ENST00000562829 MLH1P40692 756 aa18.62■□□□□ 0.57
TNRC6A-209ENST00000562829 POU5F1BQ06416 359 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms