RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
CDT1-202ENST00000562747 CSDE1O75534 798 aaKnown RBP18.36■□□□□ 0.53
CDT1-202ENST00000562747 EYA4O95677 639 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 GLP2RO95838 553 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 FGFR4P22455 802 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 PHKA2P46019 1235 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 NDUFV1P49821 464 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 FAM189BP81408 668 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 PCBP1Q15365 356 aaKnown RBP eCLIP18.36■□□□□ 0.535e-7■□□□□ 10.9
CDT1-202ENST00000562747 IFNLR1Q8IU57 520 aaPredicted RBP18.36■□□□□ 0.53
CDT1-202ENST00000562747 POP1Q99575 1024 aaKnown RBP18.36■□□□□ 0.53
CDT1-202ENST00000562747 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 POLR3FQ9H1D9 316 aaPredicted RBP18.36■□□□□ 0.53
CDT1-202ENST00000562747 ELAC1Q9H777 363 aaKnown RBP18.36■□□□□ 0.53
CDT1-202ENST00000562747 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 LRFN2Q9ULH4 789 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 PCDHB7Q9Y5E2 793 aa18.36■□□□□ 0.53
CDT1-202ENST00000562747 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
CDT1-202ENST00000562747 GLRA2P23416 452 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 PTENP60484 403 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 CABP7Q86V35 215 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 ASAP3Q8TDY4 903 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 CDK5RAP3Q96JB5 506 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 TRAIPQ9BWF2 469 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 TMEM161AQ9NX61 479 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
CDT1-202ENST00000562747 MYH15Q9Y2K3 1946 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 E9PMD0 336 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 IBSPP21815 317 aaPredicted RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 UBA7P41226 1012 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 NRIP1P48552 1158 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 RBM10P98175 930 aaKnown RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 CAPSQ13938 189 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 FAM102BQ5T8I3 360 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 MAEAQ7L5Y9 396 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 RBM23Q86U06 439 aaKnown RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 EFHBQ8N7U6 833 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 SMRP1Q8NCR6 262 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 ZNF396Q96N95 335 aaPredicted RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 PNMA5Q96PV4 448 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 MINDY3Q9H8M7 445 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 GPRC5CQ9NQ84 441 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 AGPAT5Q9NUQ2 364 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 BARX2Q9UMQ3 279 aaPredicted RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
CDT1-202ENST00000562747 KMT2EQ8IZD2 1858 aa18.34■□□□□ 0.53
CDT1-202ENST00000562747 A0A0U1RQF3 1178 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 F13A1P00488 732 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 NASPP49321 788 aaPredicted RBP18.33■□□□□ 0.52
CDT1-202ENST00000562747 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.52
CDT1-202ENST00000562747 GRIN1Q05586 938 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 BECN1Q14457 450 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 SLC39A14Q15043 492 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 ZRSR1Q15695 479 aaKnown RBP18.33■□□□□ 0.52
CDT1-202ENST00000562747 TMEM119Q4V9L6 283 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 KCNK18Q7Z418 384 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 KIFAP3Q92845 792 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 CALML4Q96GE6 196 aa18.33■□□□□ 0.52
CDT1-202ENST00000562747 FBXO2Q9UK22 296 aaPredicted RBP18.33■□□□□ 0.52
CDT1-202ENST00000562747 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
CDT1-202ENST00000562747 HOXA2O43364 376 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 ERLIN2O94905 339 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 SKIP12755 728 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 MARCKSP29966 332 aaPredicted RBP18.32■□□□□ 0.52
CDT1-202ENST00000562747 COASYQ13057 564 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 PPP2R5AQ15172 486 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 VN1R2Q8NFZ6 395 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 CCSER1Q9C0I3 900 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 KCNH6Q9H252 994 aa18.32■□□□□ 0.52
CDT1-202ENST00000562747 USP15Q9Y4E8 981 aaPredicted RBP18.32■□□□□ 0.52
CDT1-202ENST00000562747 LRRIQ4A6NIV6 560 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 EOMESO95936 686 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 AXLP30530 894 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 NAMPTP43490 491 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 RAB27AP51159 221 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 CDCA2Q69YH5 1023 aaPredicted RBP18.31■□□□□ 0.52
CDT1-202ENST00000562747 TWF2Q6IBS0 349 aaKnown RBP18.31■□□□□ 0.52
CDT1-202ENST00000562747 RINT1Q6NUQ1 792 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
CDT1-202ENST00000562747 PRSS33Q8NF86 280 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 EDAQ92838 391 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 PHOX2BQ99453 314 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 CSRNP2Q9H175 543 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 C2orf40Q9H1Z8 148 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
CDT1-202ENST00000562747 LOC730098B7Z3J9 87 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 HOXA11P31270 313 aaPredicted RBP18.3■□□□□ 0.52
CDT1-202ENST00000562747 SLC12A3P55017 1021 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 NCBP1Q09161 790 aaKnown RBP18.3■□□□□ 0.52
CDT1-202ENST00000562747 PKP1Q13835 747 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 STK38Q15208 465 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms