RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 ABCB5Q2M3G0 1257 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 KRTAP21-3Q3LHN1 58 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 DUSP28Q4G0W2 176 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 KIAA1841Q6NSI8 718 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 XRRA1Q6P2D8 792 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 TSSK4Q6SA08 328 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 SHISA5Q8N114 240 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 LSM14AQ8ND56 463 aaKnown RBP7.15□□□□□ -1.26
TCF4-213ENST00000562543 LPIN2Q92539 896 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 WNT8BQ93098 351 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 MYL10Q9BUA6 226 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 TEX13BQ9BXU2 312 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 BCO2Q9BYV7 579 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 FAM13BQ9NYF5 915 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 IGSF9Q9P2J2 1179 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 ABCF2Q9UG63 623 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 PALD1Q9ULE6 856 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 RIPK3Q9Y572 518 aa7.15□□□□□ -1.26
TCF4-213ENST00000562543 LCTP09848 1927 aa7.15□□□□□ -1.27
TCF4-213ENST00000562543 FAM221BA6H8Z2 402 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 A6NHS1 94 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 POLQO75417 2590 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 WEE2P0C1S8 567 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 TSC2P49815 1807 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 TTC3P53804 2025 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 BTG3Q14201 252 aaPredicted RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 PDS5AQ29RF7 1337 aaKnown RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 KIAA1211LQ6NV74 962 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 SLC4A10Q6U841 1118 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 MAPKAPK5Q8IW41 473 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 FBXO16Q8IX29 292 aaPredicted RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 C1orf127Q8N9H9 656 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 SH3RF3Q8TEJ3 882 aaPredicted RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 ACSF2Q96CM8 615 aaPredicted RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 CRELD1Q96HD1 420 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 FBXO28Q9NVF7 368 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 GNL3LQ9NVN8 582 aaKnown RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 DBR1Q9UK59 544 aaKnown RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 MRPL42Q9Y6G3 142 aaKnown RBP7.14□□□□□ -1.27
TCF4-213ENST00000562543 ATMQ13315 3056 aa7.14□□□□□ -1.27
TCF4-213ENST00000562543 F5H6K3 240 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 H3BRJ5 948 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 MAFO75444 373 aaPredicted RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 HLA-DOAP06340 250 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 SRFP11831 508 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 PPP2R1AP30153 589 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 TMPOP42166 694 aaKnown RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 MAGEA9P43362 315 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 PHKA1P46020 1223 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 STARD6P59095 220 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 UBE3AQ05086 875 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 ELOAQ14241 798 aaKnown RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 SEPT2Q15019 361 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 CERKLQ49MI3 558 aaPredicted RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 COLEC12Q5KU26 742 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 TMEM164Q5U3C3 297 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 SPTY2D1Q68D10 685 aaPredicted RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 ATF7IPQ6VMQ6 1270 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 SEPT8Q92599 483 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 CASP10Q92851 521 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 NSUN4Q96CB9 384 aaKnown RBP7.13□□□□□ -1.27
TCF4-213ENST00000562543 RUSC1Q9BVN2 902 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 ADGRE2Q9UHX3 823 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 SALL4Q9UJQ4 1053 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 C2orf16Q68DN1 1984 aa7.13□□□□□ -1.27
TCF4-213ENST00000562543 LOXHD1Q8IVV2 1947 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ASB14A6NK59 587 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ELL2O00472 640 aaPredicted RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 KPNA6O60684 536 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ZNF806P0C7X5 589 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 HSPA5P11021 654 aaKnown RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 ERVFC1P60507 584 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 CNTN2Q02246 1040 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 SCAPQ12770 1279 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 SGO2Q562F6 1265 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 DCLRE1AQ6PJP8 1040 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 G2E3Q7L622 706 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ATG9AQ7Z3C6 839 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 SPICE1Q8N0Z3 855 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 TGFBRAP1Q8WUH2 860 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 DNAAF4Q8WXU2 420 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 DDX23Q9BUQ8 820 aaKnown RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 PNNQ9H307 717 aaKnown RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 BCAS3Q9H6U6 928 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 GTF2IRD1Q9UHL9 959 aa7.12□□□□□ -1.27
TCF4-213ENST00000562543 DDX49Q9Y6V7 483 aaKnown RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 COL5A1P20908 1838 aaPredicted RBP7.12□□□□□ -1.27
TCF4-213ENST00000562543 URB1O60287 2271 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms