RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 FAM105AQ9NUU6 356 aa18.12■□□□□ 0.49
PKD1-226ENST00000562425 RBM19Q9Y4C8 960 aaKnown RBP18.12■□□□□ 0.49
PKD1-226ENST00000562425 PHLPP2Q6ZVD8 1323 aa18.12■□□□□ 0.49
PKD1-226ENST00000562425 CCDC169A6NNP5 214 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 ARHGEF15O94989 841 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 KRT18P05783 430 aaKnown RBP18.11■□□□□ 0.49
PKD1-226ENST00000562425 ME1P48163 572 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 SMTNP53814 917 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 PEX3P56589 373 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 NUCB2P80303 420 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 DHX8Q14562 1220 aaKnown RBP18.11■□□□□ 0.49
PKD1-226ENST00000562425 FAM187BQ17R55 369 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 GPBP1Q86WP2 473 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 BSNDQ8WZ55 320 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 TMEM117Q9H0C3 514 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 FZD8Q9H461 694 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 POLD4Q9HCU8 107 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 BLOC1S4Q9NUP1 217 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 RCOR1Q9UKL0 485 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 ZDHHC9Q9Y397 364 aa18.11■□□□□ 0.49
PKD1-226ENST00000562425 TCF20Q9UGU0 1960 aaKnown RBP18.1■□□□□ 0.49
PKD1-226ENST00000562425 COL4A6Q14031 1691 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 TBKBP1A7MCY6 615 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 NCLP19338 710 aaKnown RBP18.1■□□□□ 0.49
PKD1-226ENST00000562425 KRT85P78386 507 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 MCM6Q14566 821 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 TMEM192Q8IY95 271 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 HACE1Q8IYU2 909 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 DAW1Q8N136 415 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 FBXO22Q8NEZ5 403 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 KMT5AQ9NQR1 393 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
PKD1-226ENST00000562425 MTUS1Q9ULD2 1270 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 PCDHB2Q9Y5E7 798 aa18.1■□□□□ 0.49
PKD1-226ENST00000562425 K7ERI5 159 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 ACKR2O00590 384 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 PRKCBP05771 671 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 RB1P06400 928 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 FGFR1P11362 822 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 BMP1P13497 986 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 PLS3P13797 630 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 ARF4P18085 180 aaPredicted RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 STAT6P42226 847 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 NPTX2P47972 431 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 MAPK7Q13164 816 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 PRPF4BQ13523 1007 aaKnown RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 AMHR2Q16671 573 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 PAN2Q504Q3 1202 aaKnown RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 EPC2Q52LR7 807 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 SV2BQ7L1I2 683 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 ZNF598Q86UK7 904 aaKnown RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 SPIRE2Q8WWL2 714 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 CLP1Q92989 425 aaKnown RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 NTPCRQ9BSD7 190 aaKnown RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 C17orf80Q9BSJ5 609 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 C1QTNF1Q9BXJ1 281 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 TRIM6Q9C030 488 aaPredicted RBP18.09■□□□□ 0.49
PKD1-226ENST00000562425 AAASQ9NRG9 546 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 COG5Q9UP83 839 aa18.09■□□□□ 0.49
PKD1-226ENST00000562425 A0A1B0GUA9 196 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 SFI1A8K8P3 1242 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 H0YCG3 227 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 LIG1P18858 919 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 SCP2P22307 547 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 CTNNB1P35222 781 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 BMPR1AP36894 532 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 GATMP50440 423 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 ARSHQ5FYA8 562 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 SPOUT1Q5T280 376 aaKnown RBP18.08■□□□□ 0.48
PKD1-226ENST00000562425 SLC27A1Q6PCB7 646 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 GLB1LQ6UWU2 654 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 MRPL10Q7Z7H8 261 aaKnown RBP18.08■□□□□ 0.48
PKD1-226ENST00000562425 MICALL1Q8N3F8 863 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 CPB2Q96IY4 423 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 SPATA32Q96LK8 384 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 PLVAPQ9BX97 442 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 MRPL9Q9BYD2 267 aaKnown RBP18.08■□□□□ 0.48
PKD1-226ENST00000562425 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 TMEM134Q9H6X4 195 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 UBN1Q9NPG3 1134 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 PCDHA7Q9UN72 937 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 MTCH2Q9Y6C9 303 aa18.08■□□□□ 0.48
PKD1-226ENST00000562425 MRPL42Q9Y6G3 142 aaKnown RBP18.08■□□□□ 0.48
PKD1-226ENST00000562425 BRWD1Q9NSI6 2320 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 CNTNAP2Q9UHC6 1331 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 N4BP3O15049 544 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 B4GALT5O43286 388 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 TBCAO75347 108 aaKnown RBP18.07■□□□□ 0.48
PKD1-226ENST00000562425 FAM13AO94988 1023 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 ATF7P17544 494 aaPredicted RBP18.07■□□□□ 0.48
PKD1-226ENST00000562425 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
PKD1-226ENST00000562425 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
PKD1-226ENST00000562425 NAALADL2Q58DX5 795 aa18.07■□□□□ 0.48
PKD1-226ENST00000562425 UBXN11Q5T124 520 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms