RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ATF7P17544 494 aaPredicted RBP18.44■□□□□ 0.54
CLK3-207ENST00000562389 ARF4P18085 180 aaPredicted RBP18.44■□□□□ 0.54
CLK3-207ENST00000562389 ZNF131P52739 623 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 UBXN11Q5T124 520 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 CMTR2Q8IYT2 770 aaKnown RBP18.44■□□□□ 0.54
CLK3-207ENST00000562389 CPB2Q96IY4 423 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 TMEM134Q9H6X4 195 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 LARSQ9P2J5 1176 aaKnown RBP18.44■□□□□ 0.54
CLK3-207ENST00000562389 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
CLK3-207ENST00000562389 KIAA1671Q9BY89 1806 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 ACKR2O00590 384 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 B4GALT5O43286 388 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 HOXA2O43364 376 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 ZNF623O75123 536 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 FAM13AO94988 1023 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 IBSPP21815 317 aaPredicted RBP18.43■□□□□ 0.54
CLK3-207ENST00000562389 SMTNP53814 917 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 IQUBQ8NA54 791 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 KCNN1Q92952 543 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 PYM1Q9BRP8 204 aaKnown RBP18.43■□□□□ 0.54
CLK3-207ENST00000562389 TNMDQ9H2S6 317 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 PARVGQ9HBI0 331 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 RNF19AQ9NV58 838 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 MTMR10Q9NXD2 777 aa18.43■□□□□ 0.54
CLK3-207ENST00000562389 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
CLK3-207ENST00000562389 A0A1B0GUA9 196 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 MYMKA6NI61 221 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 SLC16A4O15374 487 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 TBCAO75347 108 aaKnown RBP18.42■□□□□ 0.54
CLK3-207ENST00000562389 CMA1P23946 247 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 NCKAP1LP55160 1127 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 ERVK-21P61565 698 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 PRPF4BQ13523 1007 aaKnown RBP18.42■□□□□ 0.54
CLK3-207ENST00000562389 BTG3Q14201 252 aaPredicted RBP18.42■□□□□ 0.54
CLK3-207ENST00000562389 FIBCD1Q8N539 461 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 DDX12PQ92771 950 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 DHX58Q96C10 678 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 FAM161BQ96MY7 647 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 TGS1Q96RS0 853 aaKnown RBP18.42■□□□□ 0.54
CLK3-207ENST00000562389 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 PCDHB2Q9Y5E7 798 aa18.42■□□□□ 0.54
CLK3-207ENST00000562389 COL4A4P53420 1690 aaPredicted RBP18.41■□□□□ 0.54
CLK3-207ENST00000562389 SZT2Q5T011 3432 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 A0A1W2PQ27 194 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 A0A1W2PQ64 194 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 A0A1W2PQD8 194 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 H0YCG3 227 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 K7ERI5 159 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 N4BP3O15049 544 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 POLR2DO15514 142 aaKnown RBP18.41■□□□□ 0.54
CLK3-207ENST00000562389 EDN1P05305 212 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 FGFR1P11362 822 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 SCP2P22307 547 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 GATMP50440 423 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 GRIN2CQ14957 1233 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 SLC27A1Q6PCB7 646 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 TAS1R3Q7RTX0 852 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 MRPL10Q7Z7H8 261 aaKnown RBP18.41■□□□□ 0.54
CLK3-207ENST00000562389 MYCT1Q8N699 235 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 TMEM161BQ8NDZ6 487 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 CNNM3Q8NE01 707 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 RSPH1Q8WYR4 309 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 DNAJC19Q96DA6 116 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 PGBD4Q96DM1 585 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 GUCD1Q96NT3 240 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 EIF2AQ9BY44 585 aaKnown RBP18.41■□□□□ 0.54
CLK3-207ENST00000562389 LRRC27Q9C0I9 530 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 TMEM117Q9H0C3 514 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 KBTBD4Q9NVX7 518 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 KCNH3Q9ULD8 1083 aa18.41■□□□□ 0.54
CLK3-207ENST00000562389 FAM237AA0A1B0GTK4 181 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 TBKBP1A7MCY6 615 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 LINC00271P0C7V0 271 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 MAPTP10636 758 aaKnown RBP18.4■□□□□ 0.54
CLK3-207ENST00000562389 PFKFB1P16118 471 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 LIG1P18858 919 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 PAN2Q504Q3 1202 aaKnown RBP18.4■□□□□ 0.54
CLK3-207ENST00000562389 CLLU1OSQ5K130 101 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 SPRED2Q7Z698 418 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 RNF169Q8NCN4 708 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 SMG8Q8ND04 991 aaKnown RBP18.4■□□□□ 0.54
CLK3-207ENST00000562389 CLP1Q92989 425 aaKnown RBP18.4■□□□□ 0.54
CLK3-207ENST00000562389 CASD1Q96PB1 797 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 HPSEQ9Y251 543 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 RWDD3Q9Y3V2 267 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 IPPQ9Y573 584 aa18.4■□□□□ 0.54
CLK3-207ENST00000562389 FRMD3A2A2Y4 597 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 TRAK2O60296 914 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 AMPD3Q01432 767 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 NT5DC1Q5TFE4 455 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 CDR2LQ86X02 465 aaPredicted RBP18.39■□□□□ 0.53
CLK3-207ENST00000562389 ABI1Q8IZP0 508 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 LPPQ93052 612 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms